KEGG   Oryza sativa japonica (Japanese rice): 3131435
Entry
3131435           CDS       T01015                                 
Symbol
rps11, OrsajCp060
Name
(RefSeq) ribosomal protein S11
  KO
K02948  small subunit ribosomal protein S11
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03010  Ribosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    3131435 (rps11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:osa03011]
    3131435 (rps11)
Ribosome [BR:osa03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    3131435 (rps11)
  Bacteria
    3131435 (rps11)
  Archaea
    3131435 (rps11)
SSDB
Motif
Pfam: Ribosomal_S11
Other DBs
NCBI-GeneID: 3131435
NCBI-ProteinID: NP_039418
UniProt: P0C462 P0C464 E9KIR3
LinkDB
Position
Pltd:complement(75407..75838)
AA seq 143 aa
MTKAIPKIGSRRKVRIGLRRNARFSLRKSARRITKGVIHVQASFNNTIITVTDPQGRVVF
WSSAGTCGFKSSRKASPYAGQRTAVDAIRTVGLQRAEVMVKGAGSGRDAALRAIAKSGVR
LSCIRDVTPMPHNGCRPPKKRRL
NT seq 432 nt   +upstreamnt  +downstreamnt
atgacaaaagctataccaaaaattggttcacgtaggaaagtacgtattggtttgcgtagg
aatgcgcgttttagtttacggaagagtgcacgtagaataacaaaaggagttattcatgtt
caagctagtttcaacaatactattataactgttacagatccgcaaggtcgggtggttttc
tggtcctccgcgggtacttgtggattcaaaagctcaagaaaagcatcaccctatgctggt
caaagaacagctgtagatgctattcgtacagtgggtttgcaacgagcagaagttatggta
aagggtgctggtagtggaagagatgccgcattacgagccattgctaaaagtggtgtacga
ttaagttgtatacgcgatgtaacacctatgccgcataatgggtgtcgacctcctaaaaaa
agacgtctgtaa

KEGG   Oryza sativa japonica (Japanese rice): 4325316
Entry
4325316           CDS       T01015                                 
Name
(RefSeq) small ribosomal subunit protein uS11m
  KO
K02948  small subunit ribosomal protein S11
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03010  Ribosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    4325316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:osa03011]
    4325316
Ribosome [BR:osa03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    4325316
  Bacteria
    4325316
  Archaea
    4325316
SSDB
Motif
Pfam: Ribosomal_S11 SnAC
Other DBs
NCBI-GeneID: 4325316
NCBI-ProteinID: XP_015638621
LinkDB
Position
1:join(24825245..24825544,24825631..24826098)
AA seq 255 aa
MRARLQTLAPALRRAASASATGPASASAAGPASLASAAPLSTAAAAAFPPPQSKTASRMG
LFSMPGGDTRQPSYGDRLMESQQLPQDYRANVPRSGDTMGLRSRIAGGENPSYFGTPSHI
FDEHKQSLVKGKRDFVYVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLSKYAAE
ATAEHVGRAARKMGLKSVVMKVKGTVFFNKKKKVILSFREGFRGERVREQSPVVFIHDVT
QLPHNGCRLPKQRLV
NT seq 768 nt   +upstreamnt  +downstreamnt
atgagagcacgcctccaaaccctggccccggccctgcgccgcgccgcctccgcctccgcc
acgggccccgcctccgcctccgccgcgggccccgcctccctcgccagcgccgcgccgctc
tccacggcggccgccgccgccttcccacctcctcagtctaaaaccgcttcacgtatgggt
ttgttctctatgcccggcggcgacacacgccaaccttcatatggagaccgtctcatggag
tcacagcagctgcctcaagactaccgtgccaatgtgccgcgttctggtgacacgatggga
ttaaggtccaggatagctggtggcgagaatccctcctacttcgggaccccatcacacatc
tttgacgaacacaagcaatctctggtgaaagggaagagagattttgtctatgtcttgctc
aagagaaacaagacctttgtgaccgtgacagacgttagggggaacaaaaagaccggggca
tccgctggttgtttggaggacaggaaagggcgctctcgtctttccaaatatgctgctgaa
gcaactgcagaacatgtcgggcgtgctgccaggaagatgggtttaaaatctgtggtcatg
aaagtgaaaggaactgtgttcttcaataagaagaagaaagtgatcctgagcttcagagaa
ggctttcggggtgaaagagtaagggagcaatctcctgtggtgtttatccacgatgtgacc
cagcttccacacaacggatgccgcctcccgaaacaacgcctggtttag

KEGG   Oryza sativa japonica (Japanese rice): 4332994
Entry
4332994           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K02948  small subunit ribosomal protein S11
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03010  Ribosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    4332994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:osa03011]
    4332994
Ribosome [BR:osa03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    4332994
  Bacteria
    4332994
  Archaea
    4332994
SSDB
Motif
Pfam: Ribosomal_S11 Synthase_beta
Other DBs
NCBI-GeneID: 4332994
NCBI-ProteinID: XP_015628011
UniProt: Q10KG1 Q0DRH1
LinkDB
Position
3:complement(join(15674490..15674685,15674779..15674948,15675331..15675462))
AA seq 165 aa
MASRRLFASLLRSTAAPRTPSTPGCLFNRAAAAAYSSSAPYNGQGFPLPQSETASRLGLF
SSPGDTRQPSYGDRLMQSQQLSQDYRARTQANNAPRFGDTMSRIAGGENSSYFGTPSRIF
DEHKQSLVKGKRDFIHVLLMKNKTFVTVTDARGNKKTGASAGCLG
NT seq 498 nt   +upstreamnt  +downstreamnt
atggcgtcccgccgcctcttcgcctccctcctcaggtccaccgcggcgccgcgcaccccg
tccacgcccgggtgcctcttcaaccgcgccgccgccgccgcctactcctcgtccgccccc
tacaacggccagggttttccacttcctcagtctgaaactgcttcacgtctgggtttgttc
tccagtcccggcgacacacgccaaccttcatacggagaccgtctaatgcagtcacaacag
ctgagtcaagactaccgtgctaggacacaggccaataatgcgccacgttttggtgacaca
atgtccaggatagctggtggcgagaactcttcctactttgggaccccatcacgcatcttt
gacgaacacaaacaatctttggtgaaaggaaagagagattttatccatgtcttactgatg
aaaaataagacctttgtgaccgtgacagatgctagggggaataaaaagactggggcctcc
gcaggttgtttggggtaa

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