Oryza sativa japonica (Japanese rice): 3131457
Help
Entry
3131457 CDS
T01015
Symbol
rps4, OrsajCp027
Name
(RefSeq) ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
3131457 (rps4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
3131457 (rps4)
Ribosome [BR:
osa03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
3131457 (rps4)
Bacteria
3131457 (rps4)
Archaea
3131457 (rps4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
Ribosomal_S4
Motif
Other DBs
NCBI-GeneID:
3131457
NCBI-ProteinID:
NP_039385
UniProt:
P0C486
P0C488
E9KIP2
LinkDB
All DBs
Position
Pltd:complement(44810..45415)
Genome browser
AA seq
201 aa
AA seq
DB search
MSRYRGPRFKKIRRLGALPGLTRKTPKSGSNLKKKFHSGKKEQYRIRLQEKQKLRFHYGL
TERQLLRYVHIAGKAKSSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRHILVNG
RIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLVKKILD
RKWVGLKINELLVVEYYSRQT
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttatcgaggacctcgttttaaaaaaatacgccgtctgggagctttaccagga
ctcactagaaaaacacctaaatccggaagtaatctgaaaaagaaattccattctgggaaa
aaagaacaatatcgtattcgtcttcaagaaaaacagaaattgcgttttcattatggtctg
acagaacgacaattacttagatatgtacatatcgctggaaaagcaaaaagttcaacaggt
caggttttactacaattacttgaaatgcgtttggataatatcctttttcgattaggtatg
gcttcaaccattcccgaggcccggcaattagttaaccatagacatattttagttaatggt
cgtatagtcgatataccaagttttcgttgcaaaccccgagatattattactacgaaggat
aaccaaagatcaaaacgtctggttcaaaattctattgcttcatccgacccggggaaattg
ccaaagcatttgacgattgacacattgcaatataaaggactagtaaaaaaaatcctggat
aggaagtgggtcggtctcaaaataaatgagttgttagttgtagaatattactctcgtcaa
acttga
Oryza sativa japonica (Japanese rice): 6450179
Help
Entry
6450179 CDS
T01015
Symbol
rps4, OrsajM_p32
Name
(RefSeq) ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
6450179 (rps4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
6450179 (rps4)
Ribosome [BR:
osa03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
6450179 (rps4)
Bacteria
6450179 (rps4)
Archaea
6450179 (rps4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
Motif
Other DBs
NCBI-GeneID:
6450179
NCBI-ProteinID:
YP_002000578
UniProt:
Q8HCN9
LinkDB
All DBs
Position
MT:complement(248580..249638)
Genome browser
AA seq
352 aa
AA seq
DB search
MPALRFKTCRLLLGNVWNRELSLIQRRILRRLRNKRRSIKRNLSQRENLNSNIKLQTTRK
LSLYYGDLPIREMHRGRERTSYIPFLLNQETRLDVILVRLHFCDTLPQARQLISHRRVCL
NNGLVTITHLKVSHGDLISFQENDARTRGEEIRRSFYIDILVGKIIGKLLPVRIWRKTKT
EWFRLLTTQRVCRLLLKSWFLQELRSYMQEEDLERTKKFGSAKVCLGSSFAEHNRMKRNL
FHFKYFFLLKRRKEEEELIRTIGEAENRKRAISPFVYKSSLYRNSTYCSGSPFTRKIRIK
RIELPTHYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLWSGNGRGQNI
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcattaagatttaaaacgtgtcgtctacttccaggaaatgttcggaacagagaa
ctttctctaatccaacgccgcattctccgaagattgaggaacaagaggagatccattaaa
agaaatctttctcagagagaaaatctaaacagtaacatcaaatcacaaactacacgaaag
ttgtccctttattatggggatttacccataagggagatgcacagaggaagagaacgaact
tcatatatcccttttttactcaatcaagaaacaagatcggacgtgattccggttcgtctc
catttttgtgacactcttcctcaagcaaggcagccgataagtcatcgaagggtttgtttg
aataatggactggtaaccattactcatttgaaagtttcccacggtgatctaatatctttt
caagaaaatgacgcgagaacccgcggtgaagaaataaggagatctttctatatcgacata
tcagttggaaaaatcataggcaaattactaccggtcagaatctggagaaaaacaaaaaca
gaatggttccgcttactcacaactcagagggtatgccgcttactactcaaatcctggttt
ttgcaagagttgcgttcttatatgcaagaagaagacttagaaagaacaaagaagtttgga
tccgcaaaagtatgcttaggcagttccttcgctgagcacaacagaatgaagaggaatttg
tttcatttcaaatacttcttcttattgaaaagaaggaaggaggaagaggaattgataaga
acaataggggaagcggaaaaccgaaaaagagcaataagtccttttgtttacaagtcttct
ttatatagaaattcgacctattgctccggatccccgtttactaggaagataagaatcaaa
aggatcgaactacctactcattattcggaggtgaatcatagaacactaaaagctgtggta
tcttatggacctaacataggtcacatccctcacgacataagattgaaagatccaaacctt
cctcttcggagcggaaacggacgtggccaaaacatataa
DBGET
integrated database retrieval system