Oryza sativa japonica (Japanese rice): 4324080
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Entry
4324080 CDS
T01015
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32
KO
K12896
serine/arginine-rich splicing factor 7
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4324080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4324080
Spliceosome [BR:
osa03041
]
Common components
Common spliceosomal components
SR proteins
4324080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
RRM_3
RRM_occluded
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
4324080
NCBI-ProteinID:
XP_015618527
UniProt:
Q5ZCD9
A0A0P0UY79
LinkDB
All DBs
Position
1:complement(join(2994653..2995076,2995391..2995480,2995562..2995758,2995888..2995983,2996093..2996132,2996850..2996977))
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AA seq
324 aa
AA seq
DB search
MPRYDDRDRYDDRYGGNTRLYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHEFAFVEFSD
ARDADEARYNLDGRDFDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGSGRCFNCGIDGHW
ARDCKAGDWKNRCYRCGDRGHIERDCRNSPKNLKRGRSYSRSPSPRRGRSRGRSYSRSRS
RSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRSPRGSPRDSRSPKGSPRDTQSPRG
SPRDSRSPRRSASPPNGRNRSPTPNASRSPAPRDSRSPMRADSRSPADHERRDMSTAANG
RSPSPRDYEDNGNHRASPRGSASP
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctatgatgaccgtgatcgctacgatgaccgttacggcggcaacacgaggctg
tacgtaggtcgtctttcctcgcgcacccggacccgggaccttgaagaccttttcggcaga
tatgggagagtgcgatatgtggatatgaagcacgagtttgcatttgttgaatttagtgat
gctcgggatgctgatgaggcaaggtacaacctggatggtcgggactttgatggaagccgc
atgattgttgagtttgctaaaggggttccacgtggccctggaggatcacgtgaatatatg
ggcagaggaccaccacctggttctggccgctgctttaactgtgggattgatgggcactgg
gcccgtgactgcaaagctggagactggaaaaacagatgctatcggtgtggagacaggggc
catatagaaagggactgccggaacagccctaagaatctcaagcgtggaagaagctactca
agatccccatcccctcgtcgtgggaggagccgtggtaggagctacagcaggagccgtagc
aggagctacagccgctcccagtctccaaggagggatagccgtaatgaaaggagatcaagg
agccctcgtgacagtcggagccctaggggaagcccccgtgacagtcgcagccctaggggg
agcccccgtgacagtcgcagccctaaggggagccctcgcgacacccagagccctagggga
agccctcgtgatagccgcagccctaggagaagtgcttcaccacccaacgggaggaaccgc
agccctacccctaatgccagcaggagtcctgcaccaagggacagcaggagcccaatgaga
gctgacagccgtagccctgctgaccatgagcgccgtgacatgagtacagctgccaatggc
cggagcccaagccccagggattatgaagacaatggcaatcatcgggcctcgcctagagga
agcgcatccccttga
DBGET
integrated database retrieval system
