Oryza sativa japonica (Japanese rice): 4324184
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Entry
4324184 CDS
T01015
Name
(RefSeq) COP1-interactive protein 1 isoform X1
Organism
osa
Oryza sativa japonica (Japanese rice)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CEP135_TSGA10_CC
CCDC39
Rod_CreS
PMD1-like
Tropomyosin
CCDC18_1st
KIP1
RRM_PARN_C
DUF7491
DUF8429
Pox_A_type_inc
ATG16
CCDC3_C
Motif
Other DBs
NCBI-GeneID:
4324184
NCBI-ProteinID:
XP_015617137
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All DBs
Position
1:complement(join(27281909..27286224,27286691..27286745))
Genome browser
AA seq
1456 aa
AA seq
DB search
MTKKHKLRKSKHLLENKKGVDDNVENILRMIGEENESAKTEPSDDSGNAFKKSKLSSLVK
GFHEEYEYLHKHYQQLIGKLENVGHSSSDSDSSDSDDEGDSSDNNNLKTKVEDALSEENG
WKQKLVEDREAKEESLEAEIEKLKQNTEEQAKEISDLKHLLDKAIKDKEATRVELSSDVA
NLSSENENLKLLVETTEREAGESHKTITLMENEIRTLSVEKQVTEKERDDLKISIVDLEN
MNGDLSNQLQETNEKCTFLSSQLEKAQLAEKEVQTLLSEIEKIKNENLMLSRENDNLKAC
EQNLGTECSQLKATIAETKAENSTLTEEKHLLESKLKLLGVEIDDLIAEKEELMNSMNIE
RGAAAEEKEMLVSKHSKCLTELEKAQSSVKELESTNGDLNDKIAVLQNEKNSLSSELQQL
EASFENLGNDLEQELERISIMHKNNEDLELVNSNLQNDLATVQGQKNEAVASTLELGNKL
EEKNQQISNLQEAVENLEAAKTNMYNEVTVHQEKCTFLSSQLEKAQLAEKEVQTLLSEIE
KMKNENLMLSRENDNLKACEQNLGTECSQLKATIAKTKAENSTLTEEKHLLESKLKLLGV
EIDGLIAEKEELMNSMNIERGAAAEEKEMLVSEHSKCLTELEKAQSSVKELESTNGDLND
KIAVLQKEGSSLASELQQLEASFKNLGNDLEQKFEQISVMQKNNEELELANSNLQNELAM
VQEQKNEAVASTVELGNKLEEQNQQISNLQEAVENLEAAKTDMYNELTVCQEEKNAALLQ
VQQLEANLKNLESELEQKQSQVSALEQANEELREKISSLERQLEEARSKLQDEIIKLQGE
KERALDNLQQSNTSIKTFEEELEKQREHNSILQLANDDLHKSIANLEKELEDTKVSSHAE
ILALQEQKNKALSDLQQSEISIENFRMELEQGREKISILDLSNEEMKDNNYRLNQQLEEI
RTSLHAEIAALHEEKDAAQLELQQSLASARNLETVLEKQTENLSTLQHANDNLKKNNCTL
TEQFEVIKIELQEEVKMAHEEKDATLTQLEKSEDSIKNLESELAQLKEELSVQMESNSSL
NKQLEEAILKVSNLTEELETVQAETASKINDMETNTKDLVNTIVLLSSQKNKVEEHMKII
TEACMEKMSFMKDFEDQVKQKITDREIAIACLQQSLRGIIGSCQRLQYAYGEVSTKASHL
EVLRRNHLVQIDTLENKHTEIMEKHRHLGEENTSANKENRKLQNHVQELEAQLQLARQKL
RVTEAESKSKEDSYVMAVEKSHREIQYLEQKIQKYSGQINSLEETLVQIKGNAESGTSTL
VDQLDQLESHFNKSFSHFSARSFACSEELKLLRNRLQHHLAEQKELVKKNDVLGMRLREK
ENVLSEMVRSASEAKKKMAHLEKTIDEKEEEISARVQEKREAIKQLSNAIIYHKNNSDDL
IRYIRNHNRRRLPFCL
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaaacacaaacttaggaaatccaaacatcttctggagaacaaaaaaggtgtt
gatgataatgtggaaaacattctacggatgataggcgaggagaatgaatcggccaagact
gaaccctcagatgattctggaaatgccttcaagaaatcaaaactgtcctcccttgtgaag
ggcttccatgaagagtatgagtaccttcacaagcactaccaacagctaattggtaaacta
gaaaatgttgggcacagttccagtgattcggattcatctgattcagacgacgagggagac
agctcagacaataataatcttaagacaaaggtagaagatgcacttagtgaagaaaatggc
tggaaacagaagcttgttgaagatcgtgaagccaaagaagaaagtctggaagcagaaatt
gagaagctgaaacaaaacacagaagaacaagcaaaggaaatatctgatctgaagcaccta
ctggataaagcaatcaaggataaagaagctacaagggtagagttaagttcggatgttgca
aatttgtcatctgagaatgaaaatctaaagttattggttgaaactacagagagagaggca
ggagaatcacacaaaacaataacactcatggagaatgagattaggacactgtctgttgag
aagcaagttactgaaaaagagagagatgacctgaagatttcaatagtagatctggagaac
atgaatggggatttgagcaatcagctacaagaaacaaatgagaaatgcaccttcttgtca
tcccaactcgagaaggcccagctagctgagaaagaagtgcagaccttgttatcagagatt
gagaagataaagaatgagaatttgatgctctcaagggagaatgataacctgaaagcatgt
gagcagaatttaggtactgaatgttctcagctgaaggcaactattgctgaaacaaaagct
gaaaatagcaccttgactgaagaaaaacatttacttgagagcaaacttaaacttttaggc
gtggagatagatgatctgattgcagagaaagaggagctaatgaacagtatgaacatagaa
cgtggagctgcagcagaagaaaaggaaatgctagtatccaaacattccaagtgcctaact
gagttggagaaggcacagtcaagtgttaaggaactagaatcaacaaatggtgatttgaac
gataaaatagcagtgctgcaaaacgaaaaaaattctctgtcatcagagctacagcagcta
gaagcttcttttgagaatcttggtaatgacttggaacaggaacttgagaggatttctatt
atgcataagaataatgaagacttggagttggtgaattccaatttacaaaatgatcttgca
acagtacaaggacaaaagaatgaagctgttgcttctactcttgagctcggtaataagtta
gaagagaaaaaccaacaaatttcaaatctgcaggaagccgtggaaaaccttgaagcggca
aagaccaatatgtataatgaggttacagtacaccaagagaaatgcaccttcttgtcatcc
caactcgagaaggcccagctagctgagaaagaagtgcagaccttgttatcagagattgag
aagatgaagaatgagaatttgatgctctcaagggagaatgataacctgaaagcatgtgag
cagaatttaggtactgaatgttctcaactgaaggcaactattgctaaaacaaaagctgaa
aatagcaccttgactgaagaaaaacatttacttgagagcaaacttaaacttttaggcgtg
gagatagatggtctgattgcagagaaagaggagctaatgaacagtatgaacatagaacgt
ggagctgcagcagaagaaaaggaaatgctagtatccgaacattccaagtgcctaactgag
ttggagaaggcacagtcaagtgttaaggaactagaatcaacaaatggtgatttgaatgat
aaaattgcagtgctgcaaaaagagggaagctctctggcatcagagctccaacagctagaa
gcttcttttaagaatcttggtaatgacttggaacagaaatttgagcagatttcagttatg
cagaagaataatgaagaattggagttggcaaattccaatttacaaaatgagcttgcaatg
gtacaagaacagaagaatgaagctgttgcttctactgttgagctcggtaacaagttagaa
gagcaaaaccaacaaatttcaaatcttcaggaagctgttgaaaaccttgaagcagcgaag
actgatatgtataatgagcttacagtatgccaagaggagaaaaatgcagcactcctacag
gtacaacagctggaggctaatctgaagaatcttgaaagtgagttggaacagaaacagagc
caagtttcagctctagagcaagcaaatgaagaattacgagagaaaatttctagtttggag
aggcaactagaagaggctagaagtaagctgcaggacgagatcattaagctacaaggagaa
aaggaacgagcacttgataatttgcagcagtcaaacacttcaattaagacatttgaagag
gaattagagaaacagagagaacataattctattcttcagcttgctaatgacgatctgcac
aagagcatcgctaacctggagaaggaacttgaagacaccaaggttagttctcatgctgaa
attttagcactacaagaacagaagaacaaagcactgtcagacttgcagcagtctgaaatc
tctatcgagaacttcagaatggagttagagcaaggaagagagaaaatttcaatcttggat
ctatctaatgaagaaatgaaggataacaattatagactgaaccagcaattggaggagata
aggactagtctgcatgctgagattgcagctctacatgaagagaaggatgcagctcaatta
gagttacagcaatctctggcttctgcgaggaacttggagacggtgctagaaaagcaaaca
gagaacctttcaactctacagcacgctaatgataacttaaagaagaacaattgtaccttg
actgagcaattcgaagtaatcaagattgagctgcaggaggaggttaagatggcacatgaa
gagaaggatgccacactaacacaactagagaagtcagaggattctatcaagaatcttgaa
agtgagttggcacagctgaaggaggaactatcagttcagatggaaagcaattccagcttg
aacaagcaattggaggaggcaatattgaaagtgtcaaacttaactgaggagctcgagaca
gttcaagctgagactgccagtaaaattaatgacatggaaactaacacaaaagatttggta
aatacaattgttctattatcttctcagaagaacaaagtggaggagcatatgaaaattatt
accgaagcatgcatggagaaaatgtcatttatgaaagatttcgaagatcaagtaaagcaa
aaaattacagatcgtgagatagcaattgcttgcctccagcagagcctcagaggaattatt
ggcagctgccagagactccagtatgcatatggagaggtatccacaaaggcatcacacctt
gaggtacttaggaggaatcacctcgtgcagatagatacattggagaacaaacacacagaa
attatggagaaacatcgtcatttaggggaggaaaatacatctgcaaacaaagagaacaga
aagctacaaaatcatgtccaagaacttgaagctcagctccagctagccaggcagaagctt
agagttactgaggcagaaagcaaaagcaaagaagacagctatgtgatggcagtggaaaaa
tcacatagagagatccagtatcttgaacagaaaatacagaaatattctggacagatcaac
tcactggaagaaactctcgtacaaataaaaggaaatgctgagtccggaacctccacactg
gttgatcaattggatcagctagaatcacatttcaataagagtttttcccacttctctgcc
cgttcatttgcatgcagtgaagagctcaagctcttaaggaacaggttacagcaccatctt
gctgaacagaaagaattggtcaagaagaatgatgtgctaggtatgaggttgagagagaaa
gaaaacgttttgtcagaaatggtgagaagtgcttccgaggcgaagaagaagatggctcac
cttgagaagacaattgacgagaaagaagaagagatatcagctagggtgcaagagaaaaga
gaagctatcaagcaactgagtaatgcaattatttaccacaagaacaatagcgatgatctg
atccgctacattcgcaaccataaccgccgtcgccttccattttgtttgtaa
DBGET
integrated database retrieval system
