Oryza sativa japonica (Japanese rice): 4324331
Help
Entry
4324331 CDS
T01015
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
4324331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4324331
Membrane trafficking [BR:
osa04131
]
Endosome - Golgi transport
Others
AP-4 complex
4324331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
HEAT_2
Cnd1
HEAT
HEAT_EZ
INTS1_R4
PDS5
TOR1L1_N
NPHI_C
Motif
Other DBs
NCBI-GeneID:
4324331
NCBI-ProteinID:
XP_015616647
UniProt:
Q7F2Y2
Q8RZX0
LinkDB
All DBs
Position
1:complement(join(40566414..40567424,40567660..40567803,40568595..40568672,40569117..40569233,40569320..40569376,40569887..40570018,40570120..40570317,40570759..40570869,40570965..40571180,40571274..40571459,40571985..40572587))
Genome browser
AA seq
950 aa
AA seq
DB search
MEQLRTIGRELAMGSQGGWGQSKEFLDLVKSIGEARSKAEEDRIISRELDHLKRRLADPD
VPRRKMKELLLRLVYAEMLGHDASFGHIHAVKMTHDESLPLKRTGYLAVSLFLDERHDLV
ILVVNTIQKDLRSDNYLVVCAALTAACRLIGEEAIPAVLPQVVELLAHPKEAVRKKAVMA
LHRFYQRSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLYDLILEDPNSYKDLVVSFVNIL
KQVAERRLPTSYDYHQMPAPFIQIKLLKILAVLGSGDKQASGNMYMVLGDIFRKGDTASN
IGNAILYECICCISSIFPNAKMLDAAAETTSKFLKSDSHNLKYMGIDALGRLIKINPDIA
EEHQLAVIDCLEDPDDTLKRKTFELLYKMTKSTNVEVIVDRMIEYMINITDHHYKTEIAS
RCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNIRVAHNLMRLIAEGFGEEDEGADSQLRS
SAVDSYLRIVGEPKLPSSFLQIICWVLGEYGTADGKYSASYIIGKLYDVAEAHPTDDTVR
AYAISAILKIFAFEIALGRKIDMLPECQSLIDELSASHSTDLQQRAYELQALLGLDKQAV
ENVMPADASCEDIEIDRNLSFLNGYVQQAIENGAAPYIPESERSGVVSVGNYKAQDQQET
SAHALRFEAYELPPAASQASISPTTDLVPVPEPSYYKEDHQMSRSQPSGDSLSGEFGLKL
RLDGVQKKWGRPAYSSSSTPSSSTSSQQATNGGVSSEVGGSTSSQARESTYGSKRQQATE
VSAEKQRLAASLFGKADRKTQAGRKTAKESSSTEKVATANATPQPAKEQVIPSAPPPDLL
DLGEPVSSSPPLADPFTQLEGLLGPASASPVVSETPASSTSKTPDLMSIFSDDVQTGVTS
GSTEPSLGVNVVAAKKGPSLQDALQKDAAARQVGVTPTGNNPILFKDLLG
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctgcggacgatcgggcgggagctggcgatggggtcgcagggagggtggggg
cagtcgaaggagttcctcgaccttgtcaagtccatcggcgaggcgcggtccaaggcggag
gaggaccggatcatctcgcgggagctggatcacctcaagcgccgcctcgccgaccccgac
gtgccccgccggaagatgaaggagctcctcctccgcctcgtctacgccgagatgctcggc
cacgacgcctccttcggccacatccacgccgtcaagatgacccacgacgagtccctcccg
ctcaagcgcacgggctacctcgccgtctccctcttcctcgacgagcgccacgacctcgtc
atcctcgtcgtcaacaccatacagaaggacctcaggtccgacaactacctcgtcgtctgc
gccgcgctcaccgccgcctgccgcctcatcggggaggaggccatcccggccgtgctgccc
caggtcgtcgagctgctcgcgcatcccaaggaggccgtgcggaagaaggccgtcatggcg
ctccaccgattctaccagcgatccccctcatccgtctctcaccttgtctccaacttccgc
aagaggctctgtgataatgatcctggggtcatgggtgcaactttatgccccctctatgac
ctgattttggaagatccaaattcgtacaaggatttggttgttagttttgttaacatcctc
aaacaagttgcagagaggaggcttccaacttcctatgattaccaccaaatgcctgcacca
tttattcagattaaactattgaaaatacttgcggtgctgggtagcggtgataagcaggca
agtggaaatatgtacatggtcttgggtgacatattcaggaagggtgacactgcaagcaac
attggcaatgcaatattgtatgagtgcatatgctgtatttcatccatattcccgaacgct
aagatgcttgatgctgcagctgaaacaacatcaaagtttctgaagagtgatagccataat
cttaagtacatgggcattgatgctcttggccggttaattaaaataaatccagatatcgca
gaagagcaccagctggctgttattgattgcttagaggatcctgatgacactttgaaacgc
aagaccttcgagcttctttacaagatgacaaaatcaacaaatgttgaagtgattgttgat
cgaatgattgagtatatgattaacatcactgatcaccattacaagacagaaattgcatct
cgttgtgttgagctagcagaacaatttgcacctagcaatcagtggttcatccagaccatg
aacaaagtctttgagcatgctggagatcttgtcaacatccgagttgcacataatttaatg
cgacttattgctgaaggctttggagaggaggatgaaggtgctgatagccaactaagatcg
tcagctgtagattcctatctacggattgttggggagccaaagcttccttcttcgtttctg
cagataatatgctgggttttgggagaatatggaacagcagatgggaaatattcagcttca
tatattattgggaagctgtatgatgtggcagaggcccacccaactgatgacactgtcagg
gcttatgcaatctccgcaattttgaagatctttgcgtttgaaatcgctcttggaaggaag
atcgatatgctacccgagtgccaatcgttgatagatgaattgtcagcttcgcattcaaca
gacttgcagcagcgtgcatatgagctacaggctttgctaggtttggacaaacaggctgtt
gagaatgtaatgccagccgatgcaagctgcgaagatattgagatcgacagaaacctctcg
tttctaaatggttatgtgcagcaagccattgaaaatggtgctgcaccctacattcctgag
agtgaacgctcaggagtggtaagtgttggcaactacaaggcccaggatcaacaagagaca
tctgcccatgctcttagattcgaggcctatgagctacctccagcagcttcacaggccagt
atttccccaactactgacctggttccagttccagaaccaagctactataaggaagatcac
caaatgtcaagatcccagccatcaggcgattctctttctggtgaatttggtctcaaactt
cgtcttgatggagttcagaagaaatgggggagaccagcctattcctcctcatctacgcct
tcaagttcaacatctagtcaacaagcaaccaatggaggcgttagttctgaggtgggaggg
tcaacaagttcacaggctcgggaatccacatatggttccaagagacagcaggccactgaa
gtttcagcggaaaagcaacggttggctgcttcactctttggtaaagctgataggaagacc
caggctgggcgaaagacagcaaaggagagttcctcaactgagaaagtagctactgctaat
gcaacaccgcagccagccaaagagcaagtaatcccttctgccccaccacctgatcttctg
gatctgggagagccagtttcatcaagtcctccattagctgatcctttcacacagttagaa
ggtcttctcggaccagcatcagcctctcctgtggtttctgaaaccccagcttcgagcact
tcgaaaacaccagatcttatgtcaatcttttcggatgatgtacaaactggagtgaccagt
ggatccacagaaccatcactcggggtaaatgtggtcgctgcaaagaagggccctagcctt
caagatgccttgcagaaggacgcagcggcccggcaagttggtgtgacgccgacagggaac
aaccctattctattcaaggacttgttaggctag
DBGET
integrated database retrieval system
