KEGG   Oryza sativa japonica (Japanese rice): 4324365
Entry
4324365           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4324365
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     4324365
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    4324365
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-RING_10 zf-rbx1 Prok-RING_4 Zn_ribbon_6 RING_XB3-XBAT31 Rad50_zn_hook zf-Nse zf-RING_6 Sina_RING TerY_C zf-RING_4 TRAF3_RING zf-ANAPC11
Other DBs
NCBI-GeneID: 4324365
NCBI-ProteinID: XP_015642382
UniProt: Q5JLM3 A0A0P0VC57
LinkDB
Position
1:join(40752668..40752967,40753102..40753177,40755000..40755130,40755213..40755431)
AA seq 241 aa
MSSHDFARRVPKRRRTNKLLSQLLPDLNSLPAEGADDGGSPSSSVLVSHAQTSAVAVAGT
SQYLVPAVVAGPHIGMSSCPIIVDDINDDVVIYSASSFPQVRQQAPRTEPVVTIEDDSET
TPGQAGDAVDEHVDILLSLTLGRYPRHGHQRSSNISTSPVIHIIDTPSNALPEPEKAVPK
EPTFNCPVCMNELVEPSSTICGHIFCKQCIKASIQAQKKCPTCRRKLTMNNFHRVYLPSA
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atgagctctcatgattttgcaagaagggttccgaagaggcggcggactaacaagttgctt
tcgcaacttcttccggacctgaactcactcccagctgaaggagctgatgatgggggatca
ccttccagtagtgtgctcgtctcacacgcccagacttctgctgtagctgtggctggaacc
tcgcagtatttggtgccagcagttgttgcggggccgcacattggaatgagtagttgtccc
attatcgtggatgatatcaatgatgatgttgtgatttattctgcaagctcgttccctcaa
gtgaggcagcaggctccaaggacagaacctgttgtgaccatagaagatgattctgaaact
acccctggacaagcaggggatgcagttgatgagcatgtggatatactactatctctgact
ctgggcaggtatcctaggcatggtcatcagagatcctccaacatcagcaccagccctgtg
atacatataattgacacacctagcaatgcactccctgaacccgagaaggccgttccgaag
gaaccaactttcaattgccctgtctgcatgaacgagctggtcgaaccgtcatcgaccatc
tgcggtcacattttttgcaagcagtgtatcaaggcctcaatccaggctcagaagaagtgc
cctacctgccggaggaagctgaccatgaacaacttccaccgcgtgtatctcccttctgcg
gagtaa

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