Oryza sativa japonica (Japanese rice): 4324377
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Entry
4324377 CDS
T01015
Name
(RefSeq) vacuolar lysine transporter YPQ1 isoform X1
KO
K23678
solute carrier family 66 (lysosomal lysine-arginine transporter), member 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
4324377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
osa02000
]
4324377
Transporters [BR:
osa02000
]
Solute carrier family (SLC)
SLC66: Lysosomal lysine-arginine transporter
4324377
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GFIT
Motif
Pfam:
PQ-loop
Motif
Other DBs
NCBI-GeneID:
4324377
NCBI-ProteinID:
XP_015621729
UniProt:
Q5NBM2
A0A0P0V140
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All DBs
Position
1:complement(join(9147913..9147990,9148408..9148498,9148630..9148688,9148863..9148883,9149506..9149622,9149713..9149832,9149910..9150081,9150280..9150470,9150798..9150896,9150986..9151012,9151505..9151547,9151677..9151921))
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AA seq
420 aa
AA seq
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MGIFSGAGAHRPSCPSAANCAKWAQTYLKYCLCSTRDGMALTLGLLSVISWGVAEVPQII
TNYKHKSTEGLSLAFLMTWIVGDFFNLIGCFLEPETLPTQFYMALLYTITTVILTGQTVY
YSHIYHRLKAKKARATSKPQRHQRADASLREKLLGPKVIGEIRNNSHLGATVPIPTSSPI
TVNTEIVRQRHGPSSLSEYYYTSARSLSSSPVPMSGTWSANYHQTNSPPEIDDQKESLVS
EFSPAQYAASPLIKNSLSVVPWMSLLLGMSVLHFLVGTTHQEVPNGIVIPVGRRLLLLAD
DHADSSVSNGSGSGIGSFLGWAMAVIYMGGRLPQIWLNMKRGNAEGLNPLMFTFALVGNV
TYVGSILVKSMDWSKLKPNLPWLVDAGGCVLLDTFIILQFLYFHYRKRHVPDEPDSADKV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcttcagtggagcgggagcacatcgccctagctgcccgtcggccgcgaattgc
gcaaaatgggctcaaacctacctgaagtactgcctttgtagcacgagggatggcatggca
ctgacgcttggactgttaagcgtcatcagctggggagttgctgaggtgccacagatcata
actaattacaagcataagtcaacagaaggcctttcccttgcttttctaatgacatggatt
gttggggacttttttaaccttattggctgcttcttggaacctgagacgctgccaacacaa
ttttacatggctctgctatacaccatcacaactgttattctcactggacagacagtatac
tatagccacatatatcaccgtcttaaagcaaaaaaagccagggcaacaagcaagcctcag
aggcatcagcgtgctgatgcttcattgagagaaaagcttttggggcccaaggttattggg
gaaatcagaaacaatagccacctaggtgcaaccgtccctattccaacaagttctccaatt
acagttaatacagaaatagtacggcaacgacatggcccaagcagcctcagtgaatactac
tacacgtcagcaagatctctctcaagcagcccagtgccaatgtcaggcacatggtcggct
aattatcatcaaacaaattctccaccagaaatagatgaccaaaaggaatccttggtcagt
gagttttccccagcacaatatgcagcatctcctttaataaagaattctctctcagtggta
ccatggatgtcccttctcttgggtatgagtgttttgcattttttagttggaacaacccat
caagaggtgccaaatggtattgtcatacctgtcgggagaaggcttttactgttggcggat
gaccatgcagattcatctgtcagcaatggcagtggaagtggaattggaagcttccttggt
tgggctatggcggtaatctatatgggtggacgacttccccagatctggttaaatatgaaa
agagggaatgctgagggactcaatccactaatgtttacttttgcattagtgggaaatgtg
acatacgttggaagtatacttgtgaaaagcatggattggtcaaaacttaagccgaatcta
ccgtggcttgtagatgctggaggatgtgttttgcttgatacttttattattcttcagttt
ctttatttccattatcggaagcgacacgttcctgatgagcctgacagtgctgataaagtt
taa
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