Oryza sativa japonica (Japanese rice): 4324404
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Entry
4324404 CDS
T01015
Name
(RefSeq) katanin p60 ATPase-containing subunit A1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
osa04812
]
4324404
Enzymes [BR:
osa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
4324404
Cytoskeleton proteins [BR:
osa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
4324404
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_14
AAA_5
TIP49
AAA_33
Mg_chelatase
AAA_16
IstB_IS21
AAA_28
PGA28-like_dom
AAA_22
RNA_helicase
AAA_17
PhoH
TsaE
AAA_7
nSTAND3
Parvo_NS1
NPHP3_N
AAA_18
Motif
Other DBs
NCBI-GeneID:
4324404
NCBI-ProteinID:
XP_015622511
UniProt:
B7EG42
Q8S118
LinkDB
All DBs
Position
1:join(28724562..28724680,28725489..28725957,28728417..28728614,28728980..28729224,28729561..28729719,28730303..28730390,28730795..28731076)
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AA seq
519 aa
AA seq
DB search
MVSALAGLQDHLKLARDYALEGLYDTSIIFFDGAIAQINKHLTTLDDALIRTKWLNCKKA
ICDEVEIVKQLDAQLKAFKEAPGARRSSSPPIRSNNKSFVFQPLDEYPTSSPAPFDDPDV
WAPPRDTPNRRPTRGQSSTRKSSQDGAWARGPSKTGTPSRGAKPNGSKGNSGARSSTASS
TGGRKGKSSSSKADSVSSDAEEGKSKKGQYEGPDMDLAAMLERDVLDSTPGVRWDDVAGL
SEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVS
SATLASKWRGESERMVRCLFDLARFYAPSTIFIDEIDSLCTSRGASGEHESSRRVKSELL
VQIDGVNNSSTTEDGQPKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKALINI
NLKTVEVATDVDIDEVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSKDEI
SKDPVAMCDFEEALAKVQKSVSPADIEKHEKWQAEFGSA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcgcgctcgcggggctgcaggaccacctcaagctcgcgcgggactacgcgctc
gagggactctacgacacctccatcatcttcttcgacggcgccatcgcccagatcaacaag
catctaactactttggatgacgctctgattcgcacaaaatggctgaactgtaagaaagct
atctgtgatgaagtagaaatcgtgaaacagctggatgctcaattaaaggcgtttaaagaa
gctcctggggcaaggcggtcctcgtcaccccccattcgctctaataataaatcctttgtt
ttccaaccactggatgagtatccaacatcatcaccagcgccctttgatgatcctgatgtc
tgggcgccaccaagagatacaccaaatcgtagaccaacacgaggtcaatctagtacaaga
aaatcctcccaagatggagcttgggcccggggtccatcaaagactggaacacctagtcgt
ggtgcaaaacctaatggaagtaaaggaaactctggggcaagatcatccactgcctctagc
actggtgggaggaaagggaagtcaagttcaagcaaggctgattcagtgagtagcgatgct
gaagaaggcaagtccaagaaggggcaatatgaaggaccagatatggacttggctgccatg
cttgaaagggatgtcctggattctaccccaggtgttagatgggatgatgtcgcaggtctt
agtgaggccaaaagacttcttgaagaagcagttgtacttcctctctggatgcctgaatat
ttccagggtattcgccgaccttggaaaggggttctaatgtttggtccacctggtactgga
aagactcttttagcgaaggcagtagctacagaatgtggcacaacatttttcaatgtttct
tcagcaactctggcttctaaatggcggggagagagtgagcgcatggtccgctgtttattt
gatcttgcaaggttctatgctccaagtacaatcttcattgatgaaattgactccctctgc
acatctcgtggagcttctggtgagcatgagtcatcaaggagggtgaagtctgaacttcta
gttcaaatagacggtgtaaataatagttctaccactgaagatggtcaaccaaaaatagtt
atggttctggcagctaccaactttccatgggatattgatgaagcactgagacggaggctg
gagaagcgtatttatattccacttccaaattttgaaagcagaaaggcactcatcaatatt
aaccttaaaactgttgaggttgctaccgatgttgacatagatgaagttgcacggaggaca
gaaggctatagtggtgacgaccttacaaatgtttgccgtgatgcttcaatgaatggcatg
agacgaaagattgcaggcaagacccgcgatgagattaagaacatgtcaaaagatgagatc
tcaaaagacccagtggccatgtgtgactttgaggaagctctggccaaggttcagaagagt
gtatcacccgctgatatagaaaagcacgagaagtggcaggccgagtttgggtccgcttga
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