KEGG T01015: 4324616

Oryza sativa japonica (Japanese rice): 4324616

Entry

4324616           CDS       T01015

Name

(RefSeq) ubiquitin C-terminal hydrolase 13

K11838

ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]

Organism

osa Oryza sativa japonica (Japanese rice)

Pathway

osa03083

Polycomb repressive complex

Brite

KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    4324616
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:osa01002]
    4324616
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4324616
Enzymes [BR:osa01000]
3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     4324616
Peptidases and inhibitors [BR:osa01002]
Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   4324616
Ubiquitin system [BR:osa04121]
Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    4324616

SSDB

Motif

Pfam:

USP7_ICP0_bdg UCH USP7_C2 MATH_2 UCH_1 MATH RA_2 Ubiquitin_2 Malt_amylase_C

Other DBs

NCBI-GeneID:

4324616

NCBI-ProteinID:

XP_015612854

LinkDB

Position

1:complement(join(33158960..33159001,33159077..33159160,33159238..33159318,33159491..33159607,33160621..33160695,33160975..33161037,33161479..33161544,33161611..33161682,33161760..33161861,33161945..33162122,33162228..33162283,33163935..33164045,33164154..33164222,33164317..33164425,33164533..33164621,33164755..33164832,33166614..33166736,33167884..33168003,33168086..33168166,33168238..33168384,33168469..33168547,33169580..33169654,33170361..33170470,33171341..33171439,33172057..33172172,33172271..33172379,33172455..33172673,33172746..33173011,33173785..33173942,33174025..33174154,33174886..33174964,33175163..33175192))

AA seq 1110 aa
MTMVTPRAPELLQQDQDEEMLVPDQDVVVEGPQPMEDSGSTVENEQVPETSTSRFTWTIE
DFSNHRKLYSDVFVVGGHKWRVLVFPTGNSVQSLSMYLDIADANEQPHGWSKYAQFSLAV
INQLDSKYSLRKEAAHHFSTRESDWGFTSFMHLGDLYDPTKGYIVNDKCIIEAEVAVRKI
VDFWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDTPCGSIPL
ALQSLFCKLQHSDNSVSTKELTKSFGWDTVDSFLQHDVQELNRVLCEKLENKMKGTTVEG
TIQQLFEGHHMNYIECINVDYKSTRKESFYDLALDVKGCSDVYASFDKYVEVERLEGDNK
YQSEKHGLQDAKKGMLFIDFPPVLQVQLKRFEYDFVRDTMVKINDRYEFPLQLDLDKDDG
KYLSPEADRRVRNLYTLHSVLVHSGGGHGGHYYAFIRPALSDIWYKFDDERVTKEDMKRA
LEEQYGGEEELPHTNPGLNTTPLRFTKHSNAYMLVYIRESDREKIICNLDENDIPEHLKI
RLRKENEEREYKKKEKAEAHMFTALKVARDSDFAEQIGKHIYFDLVDYDNIQSLRAPKHL
TINQAKVDLSKEFGIPVQSQRFWLWAKRQNHTFRPVRPLTLQEEASSIGHLTDPSNKSLN
SELKLFLEVALGQENHPISVPPKTKDDILIFFKLYDPEKEELRYVGKLLVKASGKPADIV
QKLQEMAGFQSDEDIELYEEVMFEPSVMCEPININDSFLSSQLEDGDIICYQKRCSPEKL
DHYRCADVPSFFEYIQNRQVVHFRLLENPKDDDFTLELSKRFTYDDVVEKVANQLGLDDP
SKLRLTQHLPYSQMPKSHYIKYRGLDHLSDMLRNGNQMSDILYYEILDIPLPVLQDLITL
RVAFYHATNNEVSSHFIRLPKGSTMSDLIEDMKSKVELSYSDAEFRLFEVYKNKIRKVYQ
PSEKISVNEFNGLLCVEEVPEEEKNAGVRDRLVHVCHFIIEKQHIDYYGEPFFFLIRDGE
TLSDIKVRIQKKLLVSDEQFAKWKFAYIAHNRLAGEYFQDSDIVLSRFQKDVYGPWEQCL
GLEHSDVTPKRSCLSNQNRNSFDKAVKIFN

NT seq 3333 nt +upstreamnt +downstreamnt
atgaccatggtgaccccgcgcgcacccgagctcctgcagcaggaccaggatgaggagatg
ctggtgccagaccaggatgttgttgttgagggacctcagccgatggaagactctggatca
acagttgagaacgagcaggtaccagaaacctctacgtccagatttacgtggaccattgaa
gatttttcgaatcacagaaagctgtactctgatgtttttgtggttggggggcacaaatgg
cgggtgttagtttttccaactggaaacagtgtacagtccctttcgatgtacctagatatt
gctgacgcaaatgaacagcctcatggatggagtaaatatgcacagttcagccttgctgtg
atcaaccagttagacagcaagtactcactaagaaaagaagcagcacatcatttcagtact
cgggaaagtgattggggcttcacttcttttatgcatttaggagatctatatgatccgact
aaaggttatattgtgaatgataaatgcattattgaggctgaggttgctgtgcgtaaaata
gttgatttctggaattatgattccaaaaaggagactggctatgttggccttaagaatcaa
ggggctacatgctacatgaattctcttcttcagacgctttaccatattccgtacttccga
aaggctgtataccatatgccaactacagagaatgatacaccttgcgggagcatccctttg
gctttgcaaagtcttttctgcaaacttcagcatagtgacaatagtgtttctacaaaagag
cttaccaaatcttttggatgggataccgttgattctttcctgcagcatgatgttcaagaa
ctgaatcgtgttctctgcgaaaaactggaaaacaaaatgaagggaactactgtggaaggg
acaattcaacagctatttgaaggtcatcatatgaattatattgagtgcattaatgttgac
tacaaatctacaaggaaagaatcattctatgatcttgcacttgatgtcaagggctgttca
gatgtttatgcatcatttgataagtatgttgaagtagagagattggaaggtgataataaa
taccagtctgagaaacatggtttgcaggatgccaagaaagggatgctttttattgacttc
cctccagtcctgcaagttcaattaaagcggtttgaatatgattttgtgcgggataccatg
gttaagataaatgaccgctatgagttcccattacaattagatcttgacaaggatgatgga
aaatacctctctccagaagctgacaggagggtgcgtaacctctatactctacacagcgta
cttgttcatagtggtggtggtcatggtggacactactacgcctttatacgcccggcactt
tcagatatatggtacaagtttgatgatgaacgagtgacaaaagaagacatgaagcgggca
ttagaggagcaatacggtggcgaggaagagctcccacataccaatcctggattgaatacc
accccgcttaggtttactaagcattcaaatgcttacatgcttgtgtacattcgtgaaagt
gacagagaaaaaattatttgcaatttagatgaaaacgacataccagaacaccttaagatt
aggttgagaaaagaaaatgaagaaagagagtataagaaaaaggagaaagcagaggcccac
atgttcactgcattaaaggttgcccgagattctgattttgcagagcaaattggaaaacat
atatattttgatcttgtggattatgacaacatccaaagccttcgggcacctaaacatttg
acaataaaccaggccaaggtcgatttatcaaaagaatttggtattcctgtacaatcccaa
cgattttggttatgggctaagcgacagaaccacacatttagacccgtacgcccgttgact
ctccaggaggaagcatctagtattggacaccttacagatccatcaaataaatcactcaat
tctgagttgaaactgttcttggaggttgcattgggacaggaaaatcatcctatttctgtg
cctccaaagacaaaggatgacatattaatattcttcaagctgtatgatcctgaaaaggaa
gagctaagatatgttggaaaacttcttgtgaaagcatcagggaagccagctgatatagtg
caaaaattgcaagagatggcagggtttcagtcagatgaagatattgaactgtatgaggaa
gtaatgttcgagccaagtgtaatgtgtgaacctattaacattaatgattccttcctttca
agccagcttgaagatggtgacattatatgctaccaaaaacgttgttctccagaaaagttg
gaccactatcgctgtgccgatgtgccatctttctttgaatatatccaaaatagacaggtt
gtccacttcagattacttgagaatccaaaagatgatgacttcactttggagctttcaaag
cgtttcacgtatgatgatgttgttgaaaaagttgctaatcaacttggactcgatgatcct
tccaaactccgccttacacaacacctcccgtattcacagatgcccaaatctcactacatt
aagtatagaggtcttgatcatctttcggacatgctaaggaatggcaatcagatgtctgac
atattgtattatgagatactggacatccctttgccagtactgcaagatctgataacattg
agagttgccttttatcatgctacaaacaatgaggtgtcatctcactttatacggttgcca
aaaggtagcactatgtctgatttgattgaggacatgaaatccaaggttgagttatcttat
agtgatgctgaattccggttatttgaggtctacaaaaacaagatacgcaaggtgtatcaa
ccttcggagaaaatttcagttaatgaattcaatggactgttatgtgttgaagaggttcct
gaagaagagaaaaatgctggtgtgcgagaccgtttggttcatgtctgtcacttcatcata
gaaaaacagcacattgattactacggagaacctttcttctttcttatccgtgatggtgag
acattatcagatatcaaagtgcgtattcagaagaaacttctggtttctgatgagcagttt
gcgaagtggaaatttgcttatattgctcacaatcgcctggctggtgaatactttcaagat
tcagatatcgtattgagccgattccagaaagatgtttatggaccatgggaacaatgccta
ggacttgagcactcagacgtcaccccaaaaaggtcatgcttgtccaatcagaaccgcaat
tctttcgataaggctgtgaagattttcaactag

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