Oryza sativa japonica (Japanese rice): 4324679
Help
Entry
4324679 CDS
T01015
Name
(RefSeq) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
4324679
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
osa01007
]
4324679
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
osa03016
]
4324679
Enzymes [BR:
osa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
4324679
Amino acid related enzymes [BR:
osa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
4324679
Transfer RNA biogenesis [BR:
osa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
4324679
Prokaryotic type
4324679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FapA
NET2A
RPW8
DUF7040
HAUS5
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
4324679
NCBI-ProteinID:
XP_015622439
LinkDB
All DBs
Position
1:join(21746159..21746291,21746390..21746460,21746550..21746711,21747053..21747158,21748300..21748493,21748745..21748848,21748926..21749109,21749203..21749382,21749466..21749669)
Genome browser
AA seq
445 aa
AA seq
DB search
MLDINLFRTEKGGDPELIRRSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTS
KEIGKLKAKKEDASALIQSTEEIKKRLAAKETEVQEAKGTLDAKLVTIGNIVHESVPVSD
DEANNLIVRTWGERRLEGNLKNHVDLCKMLDIVALEKGADVAGGRGYYLKDEGVLLNLAL
INFGLAFLRKRGFKPMQTPFFMRKETMGKCAQLAQFDEELYKLTGDGEEKYLIATSEQPL
CAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDNE
SWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCS
NCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKENGVEVPKAL
QPYMGGIDFLPFKLDSKQVARLQIK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacatcaacctcttccgcacggagaagggcggcgacccggagctgatccgcagg
tcgcagcgcaaccgctccgcctccgtcgagctcgtcgacgaggtcatcgccctcgacgac
cagtggcgccagaggcaattcgagctcgacaaaatccggcaggagctcaacaaaaccagc
aaggaaatcggcaagctcaaggctaaaaaggaggacgcgtcggctctgattcagagcacg
gaagagattaagaagaggttggctgccaaggagacggaggtgcaggaggccaagggcacg
ctcgatgccaagctcgtgacgattggaaacattgtgcatgaatccgtccctgtcagcgat
gacgaggctaacaatttaattgtacggacatggggagagaggaggctggagggtaatttg
aagaatcacgtggatctttgtaagatgcttgacatagtagctttggagaaaggtgctgat
gtagcaggtggaaggggttactatttaaaggatgaaggtgtcctactgaacttggcattg
ataaattttggactcgcttttctgagaaagcgaggcttcaagccaatgcaaactcctttt
ttcatgagaaaggaaaccatgggaaaatgtgcccagttggcccaatttgacgaagagctt
tacaagctaacaggcgatggagaggaaaagtatctcatcgctacatccgagcaaccgctg
tgtgcgtatcatctaggtgatcgaatttatcctgctgaattgccaattagatatgctgga
tattccacctgcttccggaaagaagctggttcacatggaagggacacggctggtatcttc
agagtccaccaattcgaaaagattgagcaattctgtgttacaagtccaaatgacaatgaa
tcctgggagatgcatgaagaaatgataaaaaattcagaagatttctacaaggagattggc
ctaccgtaccaacttgtctccattgtgtctggtgctcttaatgatgctgcagctaagaag
tatgatttagaagcatggttccctgcatcaaaaacctatagggaattagtgtcctgctca
aattgcacagattttcaagcaaggagacttggtataggttatggccagaaaaagaatgat
gagcaatccaagcaattcgttcatatgttgaactcaacattgactgccactgagaggacc
ctttgctgtattttggagaacttccagaaggagaatggtgtcgaagttccaaaagcattg
cagccttacatgggtggaatcgatttccttcctttcaagctggatagcaaacaagttgct
cgactccaaatcaaataa
DBGET
integrated database retrieval system
