KEGG   Oryza sativa japonica (Japanese rice): 4324714
Entry
4324714           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein isoform X2
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4324714
Enzymes [BR:osa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     4324714
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    4324714
 Prokaryotic type
    4324714
SSDB
Motif
Pfam: TruD PUS7L_N R3H_PUS7L
Other DBs
NCBI-GeneID: 4324714
NCBI-ProteinID: XP_015636622
UniProt: B9ET96
LinkDB
Position
1:complement(join(33266567..33266596,33266715..33267030,33267191..33267259,33267596..33267633,33267776..33267836,33267908..33267975,33268087..33268247,33269045..33269109,33269241..33269314,33270516..33270603,33271005..33271067,33271158..33271237,33271526..33271582,33271690..33271762,33271882..33272120,33272204..33272383,33272508..33272798))
AA seq 650 aa
MRGRHLLSPLLSPLAYPKPPSSRLAPRRVASHRTVAPPPAARRAPLSEPDVGISLFASAL
PGFRGALKQRYSDFVVHEVALDGSLVRLTSFDLPDGECVDAKEGGMDEAQALESFRLLCG
DADCEALRGFLERVSEGGDSDVSPIILSADADKTHRSEVHDFFKRNFEALLTDTVEHSDG
IQRCIRVRLKPGRRERRDVDGRGRNRKGTGSSGWRDDKPFDSRGSIIWPDHLGKFIRFHL
YKENKDTQEALGKIGKMLGLQPRSFGFAGTKDKRAVTTQQVTVFKVQASRLVALNSKLIG
IKVGDFSYVKEGLALGQLMGNRFTITLRSVVTESEDVIKAALDGLITNGFINYYGLQLQR
LKKYPGNYLQALMAIPRTLRLMYVHSYQSYLWNHAASMRVQKYGISRVVEGDLVYKKEAP
FEQGALKATSEDDGQTMSSEMNACCETLPEEMIQSVKIADSEDLSKSLYTFEDVVLPLPG
SETLFPGNEVAGIYHEIAMKDGINLRESVHGVEDFSITRMKGGYRRVIQRPIDFEWDLIT
YTDEKIPLVETDLDVLSKTKPLEVNELLSDGISSCTSHDSGLEASLDASESINGASLVVA
EAKSIGSSDMLEKLAIKLAFTLPASSYATMAIRELMKTSTSVAHQKTLNI
NT seq 1953 nt   +upstreamnt  +downstreamnt
atgcgaggccgccatctcctaagccctctcttatcccctctcgcctacccaaaacccccc
tcctctcgcctcgctccccgccgcgtcgccagccaccgcaccgtagccccgccgcccgcc
gcgcgccgcgccccactgtccgagcccgacgtcggcatctccctcttcgcctccgccctc
ccgggcttccgcggcgccctcaagcagcgctactccgacttcgtcgtccacgaggtcgcc
ctcgacggctccctcgtccgcctcacctccttcgacctccccgacggcgagtgtgtagat
gcgaaggaaggcggcatggacgaagcacaggcgctggaatcgttccggctgctctgcggc
gacgcggactgtgaggcattgagggggtttctggagagggtttcagagggaggcgacagc
gatgtctcaccgatcattctctctgctgatgccgacaagactcatcgctcggaagttcat
gatttcttcaagaggaacttcgaggccttgcttacagatacagttgagcacagcgatgga
atccagaggtgcatcagggtgaggttgaagccggggcgacgcgaacggagggatgttgat
gggagggggaggaataggaaaggcacgggaagttcgggctggagagatgacaagccattt
gatagtagaggatctataatctggcctgaccatctagggaagttcataaggtttcatctt
tacaaggagaacaaggacacccaagaggcactaggaaagataggcaagatgctagggctt
cagcctcgatcattcgggtttgcaggaacaaaggataaacgcgctgttacaactcaacag
gtcacggttttcaaggtgcaagctagtaggttggttgctcttaacagtaagctcattggc
attaaagttggagacttcagttatgtgaaggaaggtcttgctcttggtcaactgatgggg
aaccgatttacaattaccttgaggagtgttgttacagagtctgaagatgtgattaaggct
gctcttgatggattaataacaaatggatttatcaattattatggtctacaacttcagcgc
ttgaagaagtaccctggcaactatctacaagcactaatggctatacctagaacactgaga
ctgatgtatgtgcatagttaccagagttacttatggaaccatgctgcaagtatgagagtt
caaaagtatggtatttcacgagttgtagaaggtgacttggtttacaaaaaggaagcccct
tttgaacaaggagctttaaaggctacttcagaagatgacggtcaaactatgtcatctgaa
atgaacgcatgttgtgaaacgcttccagaagaaatgatccagtctgtcaagatagcggat
tctgaagatttatcaaagtccctgtacacatttgaggatgtagtcctccctttgcctggt
tcagaaacattgtttcctgggaacgaagttgctggaatttatcatgaaatagctatgaag
gatggcattaatctaagagagagtgtccatggtgtcgaggacttctctattacaaggatg
aaaggaggttatcgtcgggtgatccagcgacctattgattttgaatgggatctcatcact
tatacagatgagaaaatacctttagtagaaacggatttagatgttttgtctaaaacgaag
ccattagaagtaaatgaactactatcagatgggatttccagctgtacatcacatgattct
gggctggaagcttcattggatgcctctgaatcaataaatggagctagcctagtagtagca
gaagccaaatctattggcagctcggatatgttggagaaactggccataaaattagcattt
actctaccagcatcatcttatgctacaatggctattagggagttgatgaagacttcaact
tcggttgctcatcagaaaacattaaacatctga

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