Oryza sativa japonica (Japanese rice): 4324745
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Entry
4324745 CDS
T01015
Name
(RefSeq) sorting nexin 1
KO
K17917
sorting nexin-1/2
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4324745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4324745
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
osa04990
]
4324745
Membrane trafficking [BR:
osa04131
]
Endocytosis
Macropinocytosis
Sorting nexins
4324745
Domain-containing proteins not elsewhere classified [BR:
osa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
4324745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
DUF7623
LBP_M
CCM2_C
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
4324745
NCBI-ProteinID:
XP_015620548
UniProt:
Q5N7G9
Q0JHI3
LinkDB
All DBs
Position
1:complement(join(37943676..37943885,37943979..37944039,37944287..37944366,37944477..37944545,37944649..37944782,37945112..37945271,37945422..37945493,37946052..37946185,37946325..37946460,37947212..37947355))
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AA seq
399 aa
AA seq
DB search
MSQERSQSQSPRSPASAAGVPFLSISVTDPVKMGTGVQAYISYRVITKTNLPDFEGQEKI
VIRRYSDFEWLHDRLAEKYKGIFIPPLPEKNAVEKFRFSKEFIELRRQALDLFVNRIASH
PELKQSGDLKIFLQADEEKMDRERSYETGIFKKPSDFLQMFKDVQSKVSDVVLGKEKPVE
ESSPEYEKLKNYIFELENHLAEAQKQAFRLVKRHRELGQSLADFGKAIKLLGACEGDSLE
KVFSEVGSKSEMLSVKLQREADNLLFNFEEPLKDYVRAVQSIKATMVDRANAFRQHHDLF
QQKEYKGVNLEKLKFVNPDKFSELEAEVRELTADSEEATKRFEHIVAVMNEELARFQEQK
TADIGFAFHEFAKGQAKLAKDIADAWRGVLPKLEACSTS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggagaggagccagtcgcagagcccccggtcgccggcgtcggcggctggggtg
ccgttcctgtcgatctccgtcacagatcctgtgaagatgggtaccggagtccaggcctac
atctcctatcgcgtcatcaccaagaccaacctgcctgactttgaggggcaagagaaaatt
gttatccggcgctatagtgactttgagtggttgcatgatcgtcttgctgagaagtacaaa
ggcatttttatacctccccttccagagaagaatgctgttgaaaaattccggtttagcaaa
gagttcattgaattacggcgtcaagccctggatctatttgtcaatagaatagcttcacat
cctgaactcaagcaaagtggagatttgaagatatttttgcaggcagatgaagagaaaatg
gatagagaaaggtcttatgaaactggtatattcaagaagccttctgatttcttacagatg
tttaaggatgtacaatcaaaagtcagtgatgttgttctgggaaaagaaaagcctgtggag
gaatctagtcctgaatatgaaaagcttaaaaattacatatttgagctagaaaaccattta
gcagaggcacagaaacaagcattccgtcttgtgaaaagacaccgagaacttgggcaatct
ttggcggactttggtaaggctattaagcttttaggtgcttgcgaaggggactccttggaa
aaagttttttcagaagttggatcaaagtcagagatgttatcagtaaagctgcaaagagag
gcagacaaccttctctttaactttgaagagcctttgaaagattatgtacgtgctgtgcag
tcaataaaagcaactatggtggatcgagccaatgctttcaggcagcatcatgatttattt
cagcagaaggaatataaaggggttaatctcgaaaaattgaagttcgtgaaccctgataaa
ttttctgaactagaagctgaggtccgagagttgacagcagacagtgaggaggctacaaag
aggtttgagcacatagttgcagtaatgaatgaagagcttgcacgtttccaagagcagaaa
acagctgatattggattcgcattccatgaatttgccaaaggccaagcaaagttagctaaa
gatattgctgatgcatggcgaggcgtcctcccaaagctcgaagcctgttccacttcataa
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