KEGG   Oryza sativa japonica (Japanese rice): 4324773
Entry
4324773           CDS       T01015                                 
Name
(RefSeq) serine hydroxymethyltransferase 7
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00260  Glycine, serine and threonine metabolism
osa00460  Cyanoamino acid metabolism
osa00630  Glyoxylate and dicarboxylate metabolism
osa00670  One carbon pool by folate
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01200  Carbon metabolism
osa01230  Biosynthesis of amino acids
osa01240  Biosynthesis of cofactors
osa04981  Folate transport and metabolism
Module
osa_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    4324773
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    4324773
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    4324773
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    4324773
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    4324773
Enzymes [BR:osa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     4324773
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 4324773
NCBI-ProteinID: XP_015621739
UniProt: Q8RYY6 A0A0P0VB62
LinkDB
Position
1:join(38592973..38594046,38595402..38595804,38596212..38596313,38596411..38596634)
AA seq 600 aa
MDLSRPESSDLSLGFHSLGHARGHAVTGPLRLFDDMEDAKPEKSVGGGGGGGGGGGEEED
GEEGGDQHFSLLGHALCVKRPRRALYGGGGGGGAGGGGGGGGEASSCSSSSSSLHPAKRQ
ATAERGADLEARRGAVRAWGNQALAEADPDVHALMELERDRQVRGIELIASENFVCRAVL
EALGSHLTNKYSEGHPGARYYGGNQHIDGIERLCHERALAAFGLDPACWGVNVQPYSCTS
ANLAVYTGLLLPKDRIMGLEPPSGGHVSHGYYTPSGKKVSGASIFFESLSYKVNPQTGYI
DYDKLEERAMDFHPKILICGGSSYPREWDFARMRLIADKCGAVLMCDMAHISGLVAAKEC
RSPFDYCDVVTSTTHKNLRGPRGGIIFFRRGKNLRRRTGSFSQADENDYDFEDRINFAVF
PSMQGGPHNNHIAALAITLKQVATPEYKAYIIQVKKNAQALASALLRRKCRLVTGGTDNH
LVLWDLRNLGLTGKNFEKVCEACHISINKMPIYGDNGSISPGGVRIGTPAMTTRGCLEDD
FEVIADFLIRATQIASNLMKEHGKMQKEFLRGLQNNKDIIELRNQVENFASQFAMPGFDV
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggatctctcgcggccggaatcgtcggacctgtcgctgggtttccactcgctcggccac
gcccgcgggcacgcggtcacggggccgctgcggctgttcgatgacatggaggacgccaag
ccggagaagagcgtcggtggcggcggaggaggagggggaggaggaggcgaggaggaggat
ggggaggaagggggcgaccagcacttctccctcctcggccacgcgctctgcgtcaagcgt
ccacgccgcgcgctctacggaggcggaggcggaggcggggcaggaggtggaggaggagga
ggaggggaggcgtcctcctgctcgtcttcctcctcgtcgctgcacccggcgaagcggcag
gcgacggcggagcgcggcgcggatctggaggcccgccgcggcgccgtccgcgcgtggggc
aaccaggcgctggcggaggccgacccggacgtgcacgcgctgatggagctcgagcgcgac
cgccaggtgcgcgggatcgagctgatcgcgtcggagaacttcgtctgccgcgcggtgctc
gaggcgctcggcagccacctcaccaacaagtactctgagggccatcccggggctcggtac
tatggcgggaaccagcacatcgacggcatcgagcgcctctgccatgagcgcgccctcgcc
gccttcggtctcgaccccgcctgctggggggtcaacgtccagccatactcctgcacctct
gcaaacctagctgtttacacaggtctcctcctgcccaaggaccgtatcatggggctcgag
ccgccttccggtggccatgtcagccacgggtactacacaccaagtggtaagaaggtgtct
ggagcatccatattcttcgagagcttgtcgtacaaggtgaatccgcagactgggtatatt
gattacgacaagcttgaggagcgggcaatggatttccaccctaagattctcatatgtggt
gggagctcataccccagggagtgggattttgcacggatgaggctcattgctgataagtgc
ggtgcggtgctcatgtgcgatatggcacatatcagcgggcttgttgcggccaaggaatgc
cgtagtccctttgattactgtgatgtggttacatcaactactcacaagaatctgagaggt
cctagaggtggtataatatttttcaggagagggaaaaacttaaggaggcgtactggatct
ttttctcaagcggatgagaatgattatgacttcgaggacaggataaattttgcagttttc
ccttcaatgcaaggaggaccccataataatcatattgcagccttggcgataactctgaag
caagtagcaacacctgaatacaaagcatacatcatacaagttaagaaaaatgcccaagct
ttggcatcagccttactcagaagaaaatgcagattggttactggtggcaccgataaccac
ttggtactttgggacctcagaaatttaggcttgactggaaagaactttgagaaggtctgt
gaggcatgccacatctccataaataagatgccgatatatggggataatggctcaatatct
cctgggggtgttcggattggaacacctgcaatgactactagaggttgcttggaagatgac
tttgaggtgatcgcagatttcctcatcagagccacccaaatagctagtaatcttatgaaa
gaacatggaaaaatgcagaaggaattcctgagaggcctacagaacaataaagatatcata
gaactccgtaaccaggttgagaattttgcatcgcagtttgcaatgccaggttttgatgta
tga

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