KEGG   Oryza sativa japonica (Japanese rice): 4324975
Entry
4324975           CDS       T01015                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
  KO
K20299  vacuolar protein sorting-associated protein 53
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4324975
Membrane trafficking [BR:osa04131]
 Protein recycling
  Others
   EARP complex
    4324975
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    4324975
SSDB
Motif
Pfam: Vps53_N VPS53_C COG4_N COG7 Vps54_N RINT1_TIP1 MPH2 COP9_hel_rpt HTH_Cmi2_C Bestrophin-like Laminin_II
Other DBs
NCBI-GeneID: 4324975
NCBI-ProteinID: XP_015622127
LinkDB
Position
1:complement(join(40084260..40084589,40084699..40084794,40084918..40084986,40085465..40085527,40085605..40085682,40085809..40085902,40086526..40086659,40086811..40086888,40087823..40087888,40087980..40088087,40088439..40088516,40089035..40089094,40089171..40089275,40089371..40089412,40089491..40089679,40090006..40090069,40090328..40090469,40090578..40090738,40091036..40091160,40091314..40091384,40091494..40091644,40091797..40091853,40092133..40092227,40092415..40092463))
AA seq 834 aa
MDKSSALEYINQMFPTEASLSGVEPLMQKIQSEIRRVDASILAAVRQQSNSGTKAKEELA
AATNAVQELMHKIHEIKTKAEQSESMVQEICRDIKKLDCAKRHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDVPKITELREKFKNIKKILKSHVFSD
FTSLGTGKETEDATLLQQLSDACLVVDALEPSVREELVKNFCSKELTSYKQIFEGAELAK
LDKTERRYAWIKRRLRSNEDTWKIFPPSWHVDYLLCIQFCKITRAQLIDILNNLKEKPDV
ATLLLALQRTLEFEEELAEKFSGGVTTTRNKESASDDENEDTGRNKIVSDIRKKYEKKLA
VPNDEIGHDKDKQKDLSIPGAGFNFHGIISSCFEPYMSVYIELEEKSLVDQLDKLIQEEK
WETEEGSQTYILSSSMQVFLIIRRSLNRCSALTKNETLFNLFQVFQRVLKAYASKLYARL
PKGGTGIVAAATGTDGQIRTSDRDEKMICYIVNTAEYCHQTSGELAENVAKMINPHFADK
VDISEVQDEFSAVIMKALMTLVHGLETKFDAEMVAMTRVPWSTLESVGDQSEYVNGVSSI
LSSSIPVLGNLLSPTYFQYFLDKLAASLGPRFYLNIYKCKHISETGAQQMLLDTQAVKTI
LLDIPSLGKQSTAAASYSKFVSREMSKAEALLKVILSPVDSVANTYRALLPEGTPLEFQR
ILDLKGLKKADQQTILEDFNKHSPAIKHPAVAPTVAPPVATSSAHHIAPVTTPTVSTTPS
MATLTGALANREDVLARAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq 2505 nt   +upstreamnt  +downstreamnt
atggacaagtccagcgccctcgagtacatcaaccagatgttccccaccgaggcgtcatta
tcgggcgtcgagccgctgatgcagaagatacagagcgagattcgccgggtggacgccagc
atcctcgccgccgtccggcagcagagcaactctggaaccaaggccaaggaagaacttgct
gcagcaacaaatgctgttcaggaactgatgcacaagatacacgagataaaaactaaagca
gaacaaagtgaatcaatggttcaggaaatctgtcgtgacataaaaaagctggattgcgcg
aagagacatataacaactacaataaccgctcttcatcgtcttactatgcttgtttctgct
gtcgagcaacttcaggtcatggcctcaaaacgtcagtataaagaagcagctgcacaactg
gaggcagtaaaccagttgtgcagtcattttgaagcatatagggatgtgccgaagataaca
gagctcagagagaaattcaagaatatcaagaaaatcctcaaatctcatgtgttttctgat
tttacaagcttaggaactgggaaggaaactgaggatgcaactctattgcagcagctatct
gatgcttgcttggtggttgatgctttggagccctctgtgagggaagaactagttaagaat
ttttgcagcaaggaacttacctcatataagcagatctttgaaggagcagaacttgccaag
ttagataagaccgaaaggagatatgcatggattaaacgtcgtctacgatcaaatgaggat
acctggaaaatatttccaccttcttggcatgttgactatctattgtgcattcagttctgt
aagattacaagggcccagcttattgatatccttaacaatttgaaagaaaagccagacgtt
gcgactttgttattggcattacagagaacccttgaatttgaggaagaattagcagagaaa
ttcagtggtggggtgacgacaactcggaataaagagtcagcgagtgatgatgaaaatgag
gacactgggcgtaataaaattgtttcagacatacggaagaaatacgagaaaaaactggca
gtgcccaatgatgaaattggacatgacaaagacaagcagaaagatttatcgattcctggt
gctggtttcaacttccatggaattatatcatcttgttttgaaccatacatgagtgtgtac
atagaacttgaggagaaatctctagtggatcagttagataaacttatccaggaagaaaaa
tgggagacagaggaagggagtcaaacatatattctgtcaagcagcatgcaggtgttcttg
ataataaggagaagcttaaataggtgcagtgcattaacaaagaacgagacattatttaac
ttgttccaggtatttcaaagagtacttaaagcctatgcatcgaagttatatgccagatta
ccaaaaggtggaactgggattgttgcagctgctactggtactgatgggcagatcaggacc
tccgacagggatgagaaaatgatatgctatattgttaacactgcagaatattgtcaccag
acatctggtgagctagctgagaatgttgctaagatgattaacccccactttgctgacaaa
gtggacatctctgaagttcaggatgagttctcagctgtgatcatgaaagcgttgatgaca
cttgtacatggccttgaaaccaaatttgatgctgaaatggttgcaatgactcgcgtgcca
tggtccacccttgaaagtgttggcgaccaatcagaatacgtaaatggtgtcagctctatt
ctgtccagcagtattcctgtgctcggtaacctgctttcaccaacctacttccagtatttc
ctggacaaattggcagcctctcttggacctcggttttatctcaatatatacaagtgcaag
catatatcagaaactggtgcacagcagatgcttttggacactcaagctgtaaagactatt
ctgctagacatcccatctcttggaaaacagagtaccgctgcggctagctactccaagttt
gtaagccgggaaatgagtaaagctgaagcactcctaaaggttattttgtcaccagttgac
tctgttgctaacacctaccgcgctctcctaccggaaggaacaccacttgagttccaacgg
atacttgacctcaagggattgaagaaagcagaccagcaaaccatactggaggacttcaac
aagcatagccccgctatcaaacaccctgccgttgctccaacagttgcaccaccagttgcc
acttcatccgcccaccacattgcaccggtcaccaccccgaccgtttcgaccacaccaagc
atggctaccttgacaggagctctggccaaccgggaggacgtgctcgcccgcgccgcggcg
cttgggcggggcgcggccactacagggttcaagaggttccttgcgttgacagaggcggcc
aaagatcggaaggacgggccatttcgcaagctgttcaatgcttag

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