Oryza sativa japonica (Japanese rice) (RefSeq): 4325052
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Entry
4325052 CDS
T01015
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4325052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4325052
Enzymes [BR:
osa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
4325052
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
4325052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
4325052
NCBI-ProteinID:
XP_015624973
UniProt:
O48653
LinkDB
All DBs
Position
1:complement(37625808..37636160)
Genome browser
AA seq
1534 aa
AA seq
DB search
MDEGSADAGASGRRSRARGSEAVARSAALERLRAIRDGGARAAAAVQVRIEAPIYDTVAE
EDYAALVARRRKDAGAFIVDDDGLGYADDGREEDWTHRTIHSSSDEGSDGEDGAPRKRKQ
PRPQSKRPPQQSAAAASLSAAAAMMGKQRLSSMFTSSVFRKPGSDRGRDSSLAADSIVDD
VIAEFAPDDNDREERRRRVGRVCAPAPAPTTTAHIKAENVAVDTAMAFRSDNVFEAHEVS
DHGNDMDMELKPDVEMEPKLDTPLGASAELANNSNSLEEPKQEANGEVKIEKVHRLNAKI
KTEDSRNGDMASATAGWMKICGDGDNAGGEGAVAANSNTGVDESSEFELKDGALPFYILD
AYEEPFGANSGTVYLFGKVEVGKRFHSCCVVVKNMQRCIYAIPSSSIFPRDTISRLEKNS
TTSDSSPSLRASLHELASGLKSEIADKLSDFNVSNFAMTPVKRNYAFERTDLPNGEQYVL
KINYPYKDPALPTDLRGQHFHALLGTNNSALELLLIKRKIKGPSWLSISKFLACPATQRV
SWCKFEVTVDSPKDISVLMTSTTLEVPPVVVAAVNLKTIINEKHNVHEIVSASVICCHRV
KIDSPMRSEDWQKRGMLSHFTVMRKLEGSIFPIGLSKESSDRNQKAGSNVLALESSERAL
LNRLMIELSKLDCDVLVGHNISGFDLDVLLHRAQTCKVPSNMWSKIGRLRRSVMPRLTKG
NTLYGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLAETQLKKERKEVSPHDIP
PMFQSSGALLKLVEYGETDACLALELMFHLSVLPLTRQLTNISGNLWGKTLQGSRAQRVE
YLLLHAFHARKFIVPDKFARSKEFNSTKRKMNPDTEAARPDEADPSIDDEGHHVDQGKTK
KGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVDRSADGNVPNLPASK
TTGVLPELLKSLVERRRMVKSWLKTASGLKRQQFDIQQQALKLTANSMYGCLGFSNSRFY
AKPLAELITLQGREILQNTVDLVQNNLNLEVIYGDTDSIMIHTGLDDISRAKGIAGKVIQ
EVNKKYRCLEIDLDGIYKRMLLLKKKKYAAIKVALDGSLRENIERKGLDMVRRDWSLLSK
EIGDFCLNQILSGGSCDDVIESIHSSLVQVQEQMRGGQTELEKYIITKSLTKAPEDYPDA
KNQPHVQVALRLKQNGYSGCSAGDTVPYIICSQQDSESTHSGGIAQRARHPEELKRNPDK
WMIDIDYYLSQQIHPVVSRLCASIQGTSPARLAECLGLDSSKFQSRLTESDNQDTSSMLL
SVIDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLIIGSSSGNVSNPNEGNDASINFWRR
MRCPRCPDDTDESRVSPAVLANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMG
DSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFA
ALSQTINLALMEVQKIRDRCAFGWVQLKDLAISI
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggatccgcggatgcgggcgcctccggccgccgctcgcgcgcccggggctcc
gaggcggtggcgcggtccgcggcgctcgagcgcctccgcgcgatccgcgatgggggcgcc
cgcgccgccgccgccgtccaggtgaggattgaggccccgatctacgacaccgtcgccgag
gaggactacgccgcgctcgtcgcccgccgccggaaggacgcgggggccttcatcgtcgac
gacgacggcctgggctacgccgacgacgggcgggaggaggactggacccaccgcaccatc
cactcctcctccgacgagggctccgacggcgaggatggcgccccccggaagcggaagcag
ccgcgtccgcagtcgaagcgcccgcctcagcagtccgccgccgcggcgtccctctctgcc
gccgccgccatgatggggaagcaacgactctcttccatgttcacctcctccgtgtttagg
aagcctggcagcgaccgcggtagggactcgtcgctggcggccgacagcatcgtggatgac
gtcatcgcggagttcgctcccgacgacaatgaccgcgaggagcggcgccgccgcgttggt
agggtttgtgccccggcgccagcgccaacaacaactgctcacatcaaggctgaaaatgtg
gcagtcgatacggcaatggcgttcagatcggataatgttttcgaggcccatgaggtttca
gatcatggaaatgatatggatatggaattgaagccagacgtggaaatggagcccaaattg
gacacacctcttggtgctagtgctgaattggcgaataatagtaacagcctggaggaaccg
aaacaggaggctaatggggaggttaagatagagaaggtgcatcgtctgaatgctaagatt
aagacggaggacagccggaatggggatatggctagtgcaacagcagggtggatgaagata
tgcggggatggggacaatgcaggaggtgagggagcggtggctgctaacagcaacaccggc
gtggatgaaagctcagaatttgagctgaaggatggagcgctgccattctacatattggat
gcatacgaggagccttttggtgctaattcgggcacagtatatttgtttggaaaggttgaa
gtaggcaagcggttccacagttgttgtgtggttgtaaagaatatgcaaaggtgcatatat
gctattccaagcagttcaatcttcccaagggacaccatatcaaggctagagaagaattcc
actacttctgattcttctccatcacttcgagcaagtctacatgagttagcatcaggattg
aagagcgaaatagctgataagttgtcagacttcaacgtgtcaaattttgcaatgactcca
gtcaagaggaactatgcatttgagaggactgatctaccaaatggggagcagtatgtcttg
aagataaattacccatataaggatccggcgctacctacagaccttcgaggtcaacatttc
catgcattacttgggacgaacaatagtgctcttgaattgcttctcatcaaaaggaagatc
aaggggccttcatggctttcgatctccaaatttttggcatgtccagctactcagcgggtc
agctggtgtaaatttgaagttacagttgatagtcccaaagacatatctgttttgatgaca
agtaccacgttagaagttcctcctgtcgtggttgcagcagttaatcttaaaactatcata
aatgagaaacacaatgtgcatgaaattgtgtcagcatcagtcatatgctgtcaccgtgtg
aaaatagatagtccaatgcgttctgaagattggcagaaacggggaatgctcagccatttt
actgttatgcgcaagcttgaaggcagtatatttcctataggcctctccaaggaatcctct
gataggaaccagaaggctggtagcaatgtgctggcactcgagagcagtgaacgtgcattg
ttaaaccgcttgatgatcgagcttagcaaacttgattgcgatgtacttgtgggacacaat
atttctggatttgacttggacgtccttttgcaccgtgcacagacttgcaaagtaccaagc
aatatgtggtccaagattggtcgtcttaggcgctcagtaatgcccagactcaccaaaggg
aacacactttatgggtctggggcaagtccaggaattatgtcctgcattgctggtcgtctc
ctctgtgatacctacttatgctctcgcgatctcctgaaggaggtgagttattctttgaca
caacttgcagaaacacaattgaaaaaggagaggaaagaggtctctccacatgatattccc
ccaatgttccaatcttcaggagcacttctcaagctggttgaatatggcgagactgatgca
tgtcttgctttggagctcatgtttcatttgagtgttctcccgcttacacgccaattgaca
aatatcagcggtaacctgtggggaaaaactctccagggttctagagctcaaagggtagag
tatctgctgttgcatgcattccatgcaagaaaatttattgtaccggacaagtttgcacgc
agtaaagagtttaactctacaaaacgaaaaatgaaccctgataccgaggctgcaagacct
gatgaagctgatccttcaattgatgacgagggacatcatgttgatcaaggtaaaacgaaa
aaaggtccttcatatgctggtggcttggttttggagcctaaaaagggtctatatgacaag
tatgtgctacttctggactttaacagcctttacccttcgataattcaggaatacaatatc
tgctttactactgttgaccgttctgctgatggcaatgtccctaatttgcccgcttcaaag
accactggtgttttgcctgagttgctaaagagtttggtggagaggagaagaatggttaaa
tcatggcttaagactgcttctggtctcaaaaggcagcagtttgacatccaacagcaagct
ttgaagcttaccgcaaatagcatgtatggctgcttgggcttttccaattccaggttttat
gcaaagccacttgctgagcttattacactgcaaggaagagagatattgcaaaacactgtt
gatctggttcagaataacttaaatttggaggttatctacggtgacacagactctataatg
atacatactggtctggatgacatctccagggcaaaaggaattgcaggaaaagtcattcag
gaggtgaataaaaaataccgctgtctggagattgatcttgatggtatatacaaaagaatg
ctgcttctcaaaaagaagaaatatgctgccattaaagttgcattagatggtagcttacga
gagaacattgagcgcaagggacttgatatggtcagacgtgactggagtttgctgtcaaaa
gaaattggagatttttgcctgaatcaaattttgtctggagggtcatgtgatgacgttatc
gagtcaatccatagttctctcgtgcaggtgcaagagcagatgagaggtggccaaacagaa
ttagaaaaatatatcattacaaagagcttaacaaaagcaccagaagattatccagatgct
aaaaaccaacctcatgttcaggttgctttaagactgaagcaaaatggttattctgggtgc
tctgcaggtgatacagttccctatataatttgctctcaacaggattcagagagtacacat
tcaggaggaatagctcaaagagctagacatccagaggagctgaaaagaaaccctgacaaa
tggatgattgatattgactactatttatcgcagcagattcatcctgtagtttcccgtctg
tgtgcttcgatccagggcaccagcccagctcgcctggctgaatgccttgggcttgattca
tccaagttccaatcaagattgactgagtctgataatcaagatacgtctagcatgctcttg
tctgtaattgatgatgaagatgagagatatcgtggttgtgagcccctgcgattatcatgc
ccaagctgttctactacctttgactgcccccctgtgtctagtctgattattggttctagc
tctggaaatgtatcaaatccaaatgaaggaaatgatgcttccattaatttttggcgtcgg
atgcggtgcccaagatgtccagatgacactgatgagtccagagtttctcctgcagtactt
gcaaaccagatgaaaaggcaggctgatagtttcatcaatctatattataaaggtttactg
atgtgtgatgatgagggttgcaaatactcaacgcacagtgtgaaccttagagtgatgggg
gactctgagagaggaaccatctgccccaactacccacgctgcaatggccacctagtgaga
cagtatacggaggcagatctatacaggcaattgtcatacttttgctatgtagttgatgca
actcgatgtcttgagaagttggaccagaaggcgcggcttccttttgagaaagaatttgcg
gcattaagccaaactattaacttggcattaatggaggttcagaaaatccgagacagatgt
gcatttggctgggttcagttgaaggatcttgcaatatcaatctga
DBGET
integrated database retrieval system
