KEGG   Oryza sativa japonica (Japanese rice): 4325108
Entry
4325108           CDS       T01015                                 
Name
(RefSeq) sister chromatid cohesion 1 protein 4
  KO
K06670  cohesin complex subunit SCC1
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4325108
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    4325108
SSDB
Motif
Pfam: Rad21_Rec8_N Rad21_Rec8 CNDH2_N DUF3247
Other DBs
NCBI-GeneID: 4325108
NCBI-ProteinID: XP_015616445
UniProt: A0A0P0VBI8 Q0JGX3
LinkDB
Position
1:complement(join(39657233..39657331,39657614..39657743,39657833..39657941,39658487..39658520,39658680..39659455,39659632..39659768,39660036..39660180,39660262..39660645,39660739..39661514,39661913..39661962,39662517..39662566,39662665..39662759,39662843..39663101,39666060..39666183))
AA seq 1055 aa
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSIIFPEVPIALRLSSHLM
LGVVRIYSRKVNYLFHDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFHLDDFE
LPEAAFQGDIDHHVSTKEQITLQDNPEKTGYSTSQFGLDERFGDGNSSHIGLDLEEELML
NKDQSIQLEADDGIIIQGRSAVHPTDMEVDDNQNKDESAEGYNMEDGPSSHNKLNPLSAD
GLVGNSLPNWHTYNVQTPDLNDMLLNNDGNAGPSASYYQPSPFPCDEPASPEFVSAQAPA
TPGLMEETVPSRVHESPVLSPQRKASPSSNDETAKTAENANDLVGAETTELALTKPVQIE
SSGAVQEIDSLSQQCATEELPPQAETSNLEATMDKSMINTDGVAASGEATAAKETTEVSL
VENSLELCADGPTEPVIENQTQFNDGSVDVQGGGQHAPHAILATADSQVNVEASTQEMAS
NDIPSDLPTLEFPEREKMLSAPDVELYQANDLGQVTAEKGTTESDGSNKVGSLTSRKRHL
EDSLPALESATTEKLSSRPRGKRTIDGIPDDDDLLASILVGRRTPGLRLDSTPIPPKTSS
LKRPRLTSKSTTPKRKVQMDDAMVIHADTIRQQLISTEDIRRIRKKAPCTRSEIWMIEKG
SLEDDIFHEPIFSCMCKELNDLQYRTYEIVAHPTIHNMEIHVRLDMSQTMADGSNDVGTS
GAKDSGNHQDHVVLPDGAESDAMHPEATDAADTRTDFDSHMPSDKQVNNVEGVTEQLTDN
EKETAVVEKATTNMGDSAQVDSLDKEYLQDVPADLQRSTNTNTPLFVLDDMPGPDVVLDS
SDPVSAQAVDDMKGELSDIVHDNVNAFDNKDMPTSEITVLEFTQNASGFPQPTEDENVLS
AMGENSGLQENHVGSVMDLDNMGHDFSLKECSDFGSAIQGVDTDFLMYDDEVDCDEANDD
EPNPEEFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLLSGKTRKEASRMFF
ETLVLTTKDFISVDQPNSFDFVSVKPGPKLLKSDF
NT seq 3168 nt   +upstreamnt  +downstreamnt
atgttctactcgcagttcatcttggccaagaaggggcccctcgggaccatatggatcgcg
gcgcatttggagcggaagctgcggaagaatcaggtcgcggatacggatatcggcgtctcc
gtagattcaattatattccctgaagttccgattgcacttcgattatcaagccatcttatg
cttggtgtggtcaggatctattctcgcaaggtgaactacctattccatgattgcagtgaa
gcgttgctgaagataaaacaagcctttaggtctactgccgttgatcttccccctgaagaa
tcaactgctccttatcattctataacacttccagagacattccatctggatgattttgaa
ttaccggaggctgcatttcagggtgacattgatcatcatgtaagcacaaaagaacagatc
accttgcaagacaacccagagaaaactggatactcaacatcccaatttggcttagatgaa
agatttggtgatggcaattcttcacatattgggttggatttggaagaggaattaatgctg
aacaaggaccagtcaattcaacttgaggctgatgatggcattattattcaaggtcgatca
gcagttcatcctaccgatatggaagttgatgataaccaaaataaagatgaaagcgctgaa
ggatacaacatggaggatggaccttccagtcacaacaaactaaatccgttaagtgcagat
ggtctagtaggaaacagtcttcctaattggcatacatacaatgtgcaaacacctgatctg
aatgatatgctattgaacaatgatgggaatgcaggaccatcagcttcatactatcaacct
agtcccttcccttgtgatgagcctgcatcaccagagtttgtaagtgcccaggccccggct
acacctggcctaatggaagagactgttccttccagagtgcatgaaagtcctgttctgagt
ccacagcgaaaagcttcaccatcaagcaatgatgaaactgcaaagacagctgaaaatgct
aatgatcttgtgggtgctgagacgactgaacttgcattgacaaagcctgtgcaaattgaa
tcttctggtgctgtacaggagattgattccttgagtcaacaatgtgcaactgaggaattg
ccaccccaagctgaaacctcaaacttggaagctaccatggacaagtcaatgataaatact
gatggtgtagctgcatcaggtgaagctacagctgctaaagaaaccactgaagtgtcattg
gttgaaaattctttagagctatgcgctgatggtcctactgaacctgtgattgagaaccaa
acacagtttaatgatggatcagttgatgtgcaagggggcggtcagcatgcacctcatgct
atcttagcaactgcagattcccaagtgaatgtagaagcatcaacacaagaaatggcatct
aacgatataccaagtgacctaccaaccttggaatttccagaacgtgagaaaatgctgtca
gctccagacgttgaattgtaccaggcaaatgacttgggccaggtaactgcagaaaaggga
accactgaatctgatggaagtaacaaagtaggtagtctcactagcagaaaaagacacttg
gaggacagtttgccagctctcgaaagtgcaactactgaaaaattgtctagcagaccacgt
ggtaaaagaaccattgatggtattcctgatgatgatgatttactggcgtctatattagtt
ggtagaaggacccctggactgaggcttgattcaacaccaataccacctaagacgtcatct
ttgaaacgtccaaggttgacgtcaaagagtaccacaccgaagagaaaagtgcaaatggat
gatgccatggttatacatgctgataccatacggcagcagttgatcagcactgaggatata
aggcgcattcgtaaaaaggctccatgtacccgttccgaaatatggatgatcgagaaaggt
tccttagaagatgatatattccatgagcccatcttttcctgcatgtgcaaggagctaaac
gatttgcaatatcggacctatgagattgttgctcatcccaccattcataatatggaaata
catgtacggctagacatgtcccaaactatggcagatggcagcaatgatgttggcacctct
ggcgcaaaggacagtggaaatcaccaagatcatgtagtgctaccagatggagctgagtca
gatgcgatgcatcctgaagcaactgatgcagcagatactagaactgattttgattcacac
atgccatctgacaaacaggttaacaatgttgaaggagtaactgaacaattaactgataat
gagaaagaaactgcagttgttgagaaagcaaccactaatatgggtgacagtgctcaagtt
gattcacttgataaggaatatcttcaagatgttccagctgatctgcagaggagcacaaat
acaaatacacctctgtttgtgctagatgacatgcctggtccagatgtggttctggatagc
tctgatccagtttctgcacaagcagtggatgatatgaaaggggagttgagtgacattgtc
catgacaatgtcaatgcatttgacaataaggatatgccgacttctgagattaccgtactg
gaatttactcaaaacgcttctggttttcctcagccaacagaggatgaaaatgttctgtcc
gcaatgggtgaaaattctggattgcaagaaaatcatgtaggatctgttatggatctggac
aatatggggcatgacttttcactaaaggaatgcagtgattttggcagtgcgattcagggt
gttgacacagattttctgatgtatgatgatgaggtggactgtgatgaggctaatgatgat
gagcctaatcctgaggaattccagtctcttgataacagtggatggtcttcacgtactagg
ggtgttgcaagatatctcaaaactttatttgatgaggaatctggtctgggaagaaagagt
gtggccattgatcatctgttaagtggaaagactaggaaagaagcatcaaggatgtttttt
gagacattggttctgacaacaaaggacttcataagtgtggatcaaccaaactcctttgat
tttgtcagcgttaagccagggccaaagctcctgaagtcagatttctag

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