Oryza sativa japonica (Japanese rice): 4325244
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Entry
4325244 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG3 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4325244
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4325244
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4325244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
Sina_RING
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
Prok-RING_4
TerY_C
Motif
Other DBs
NCBI-GeneID:
4325244
NCBI-ProteinID:
XP_015622215
UniProt:
Q5JN37
Q5JMT9
LinkDB
All DBs
Position
1:complement(join(43003745..43003828,43004028..43004084,43004187..43004331,43004419..43004546,43004752..43004857,43004926..43005002,43005077..43005174,43005758..43005871,43005967..43006107,43006231..43006315,43006534..43006662))
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AA seq
387 aa
AA seq
DB search
MWGDRTHHKHWNQAHVPSGTSKDKFQAKGQPKFIPDNYSSVDEVTAALRDAGLESSNLIL
GIDFTKSNEWSGRYSFGRKSLHAISATPNPYEQAISIIGRTLSPFDDDNLIPCFGFGDAS
THDQSVFSFYQDSRSCCGFEEVLERYRQIVPHLNLSGPTSFAPLIYAAISVVENSNLQYH
VLVIIADGQVTTSNTKDGKLSPQEQATIQAIVDASYYPLSIVMVGVGDGPWDAMQHFDDC
IPDRAFDNFQFVNFTEIMSTSKDMPKKEAAFALAALMEIPSQYKATQGLRPLEKHAGHVA
SHLRILPPPNKVLENDNAAASRPPTASSQSTGFGKNTTDEQVCPICLTNPKDMAFQCGHL
TCKECGPTLSTCPLCRVPITMRVRLYS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcgatcggactcatcacaagcactggaatcaagctcatgttccctctggaact
tctaaggacaaattccaggccaaagggcaaccgaagtttattcctgacaattacagttca
gtggatgaggttactgctgcgttgagagacgctggtcttgagtcatcaaatctgattctt
ggtattgacttcaccaaaagcaatgaatggtcaggcagatattcctttggaagaaaatct
ctgcatgccattagtgccacccctaatccatatgagcaagcaatttctataattgggcga
acactgtctccttttgatgatgacaacttgataccatgttttggatttggtgatgcttct
acgcatgatcagtccgtcttcagcttctaccaagacagtcgttcttgctgtggttttgaa
gaggttcttgaaagatataggcaaattgtcccacatttgaacctttcaggaccgacttct
tttgctcctcttatctacgcagcaatttctgttgtcgaaaatagtaacttgcaataccat
gtcctcgtcatcatagctgatggacaggtgaccacctcaaatacaaaggatggaaaatta
agtccgcaagagcaagcaactatacaagcaattgttgatgcaagctactatcctctttca
attgtgatggttggggtgggagatgggccatgggatgcgatgcaacacttcgatgactgt
attcctgacagagcttttgacaattttcagtttgtgaacttcacagagattatgtcaaca
agtaaggatatgccaaagaaagaggctgcatttgcccttgcagcccttatggaaatacct
tctcaatataaagcaactcaaggcctccgaccactggagaagcatgcgggtcatgtggcc
agtcatctgaggattcttcctcctccaaacaaagttcttgagaacgacaacgctgcagcc
tcacgtcctccaactgcaagctcccagtcaactggcttcggaaagaataccactgatgag
caggtttgcccaatctgcttaaccaatccaaaggacatggcttttcaatgcggtcacctg
acatgcaaggaatgtggcccaactctatcaacatgccccttatgccgcgtgccaattacg
atgcgtgtaaggctctactcgtga
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