Oryza sativa japonica (Japanese rice): 4325274
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Entry
4325274 CDS
T01015
Name
(RefSeq) transcription factor-like protein DPB isoform X1
KO
K04683
transcription factor Dp-1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
4325274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4325274
03036 Chromosome and associated proteins [BR:
osa03036
]
4325274
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
4325274
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
4325274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
DUF7795
DFF40
Zwint
Motif
Other DBs
NCBI-GeneID:
4325274
NCBI-ProteinID:
XP_015631684
UniProt:
A0A9K3Y8D1
Q84VF4
LinkDB
All DBs
Position
1:complement(join(28513211..28513298,28513379..28513449,28513895..28513990,28514099..28514167,28514253..28514393,28514472..28514525,28515107..28515150,28516122..28516443))
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AA seq
294 aa
AA seq
DB search
MAPPCGDAAAAASAAPGLANLLIREGAGLPSRPERYPPFRPCTSDSFAPISREGDDIPPQ
KKSVSLRSGGGGNAAEREEGGANRNGKKEKTGAQRITGWGLREFSKIVSKKVEAKGRTTY
NEVADEIFAELKSITQNGLEFDEKNIRRRVYDAFNVLIAIRVIAKDKKEIKWMGLTNYRY
EKIQKLEEVHKELITRIKNKKKLLQEIEKQFDDLQNITLRNQASQRPAESVNGILLPFLL
IKTSRKARVEIEISEDSKFARFDFNGAPFTMHDDVSILEAIRRNKGRAGLSIHP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctccctgcggcgatgccgcggcggctgcctccgccgcgcccggcctggccaac
ctgctcattcgcgaaggcgccggcctcccttcgcgtcccgaacggtacccgccattccgg
ccctgtacttctgattcctttgctccaatctctagggaaggggacgatattcccccccaa
aaaaaatcggtttctttacgcagcggcggcggcggcaatgcggcagagagggaggagggc
ggtgcgaacaggaacgggaagaaggagaagaccggggcgcagaggatcaccgggtggggg
ctccgtgagttcagcaagatagtttctaagaaagttgaggccaaaggaagaaccacatat
aatgaggttgccgatgagatttttgcggagctgaagtccattacgcagaacggtctggag
tttgatgagaagaatattaggcggagggtatatgatgctttcaatgtgctcattgcaatt
cgtgttattgcaaaagataaaaaggagataaagtggatgggccttactaattatagatac
gaaaagatacagaagttggaggaagttcacaaagaactcatcaccaggatcaagaataag
aagaagcttctccaggaaattgaaaagcagtttgatgaccttcagaatattacattacgc
aaccaggctagtcagaggccagcagaaagtgttaatggcatcctccttccgttcttattg
atcaagacatcccgaaaagcaagggtggaaattgagatttcggaagattcgaagtttgca
cggttcgacttcaacggtgcaccattcaccatgcatgatgatgtatcaatccttgaagcc
atcaggcgtaacaaaggaagagctggcctctccattcacccttaa
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