Oryza sativa japonica (Japanese rice): 4325286
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Entry
4325286 CDS
T01015
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
4325286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
4325286
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
4325286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
BET
Motif
Other DBs
NCBI-GeneID:
4325286
NCBI-ProteinID:
XP_015647178
UniProt:
A0A0P0V6I0
Q5QMA1
LinkDB
All DBs
Position
1:join(28597128..28597447,28598076..28598163,28599109..28599208,28599450..28599577)
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AA seq
211 aa
AA seq
DB search
MKDPFEAAVEEQESPPESPAANEEDAAGAPEGYDGASGSRGPPLRLPPSRAAPSGSGGAA
AAAARGKVVRVQKEQQEEEDDEEDHMEVDLDKLPSGTSDPDKLAKMNAILSQFTEDQMNR
YESFRRSGFQKSNMKKLLASITGSQKISLPTTIVVSGIAKMFVGELVETARIVMTERKDS
GPVRPCHIREAYRRLKLEGKIPRRTVPRLFR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacccgttcgaggcggcggtggaggagcaggagtcgccgccggagtcgccggcg
gcgaacgaggaggacgcggccggggcgcccgagggatacgacggcgccagcgggtcgcgc
gggcctccgctgcggctgcctccttcgagggccgcgccatcgggctccggtggtgccgcc
gcggccgcggcgaggggtaaggtggtgcgggtccagaaggagcagcaggaggaggaggat
gacgaggaggaccacatggaggtcgacctcgacaagctgccctccggcaccagcgacccc
gacaagctcgccaagatgaatgccatactgtctcaatttacagaagaccagatgaaccgg
tatgagtcattccgcagatctggattccagaaatctaacatgaaaaagctattggcgagc
attactggcagtcaaaagatttctctaccaacaacaattgtagtatcaggaattgcaaag
atgtttgttggtgagcttgttgaaacagctagaatagttatgactgagaggaaagattct
ggaccagtaaggccttgccacatcagagaagcctacagaagattgaaacttgaagggaag
atcccacggcggactgttcccaggctcttccgttag
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