KEGG   Oryza sativa japonica (Japanese rice): 4325353
Entry
4325353           CDS       T01015                                 
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X1
  KO
K08737  DNA mismatch repair protein MSH6
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    4325353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:osa03400]
    4325353
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     4325353
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II AAA_29
Other DBs
NCBI-GeneID: 4325353
NCBI-ProteinID: XP_015622469
UniProt: A0A0P0UZD3 Q5VR87
LinkDB
Position
1:complement(join(4245251..4245721,4246194..4246321,4246811..4246907,4247001..4247387,4247527..4247712,4247864..4248141,4248239..4248365,4248728..4248924,4249092..4249139,4249216..4249249,4249319..4249447,4250347..4250442,4250901..4250967,4251512..4251567,4252004..4252099,4252609..4253704,4254703..4254884))
AA seq 1224 aa
MQPRRRQQQQQSILSFLQKKPAAAAGEEGATPERPPRPPAASVAGIMERLVRPPRQQQQG
RDQDASQARHVEQRALPVKNQTTSNECSSALFLESCNAGDNKAAMLIAEEGSNMTPLQEP
LKSLWPSKDDFVRASTLSPELGLYQNLPPHCPKKLPFESSNNNCIGANSSFEEFDVQTPQ
DTSKTVFWRSSRGADTPLTESDSDQTPLQHPSKFSFVSPNGEYVRGATLFALDSNYTPRR
ESSEKLSSGPSDLPYIKATKLFTEFDSNGTPSQNHLKKLSSVPKNDKRIGAGAELFSEFD
PSPLKPETPVMRAVIPRLKRVQEDQRVTTNDSCSPFWGPNKKVKPAQCSPVENKVHDEMA
ESARSKFEWLNPSNIRDANRRRLADPLYDKTTLFIPPDALRKMSTSQKQYWNIKCKYMDV
VLFFKVGKFYELYEVDAEIGQKELDWKMTISGVGKCRQVGISESGIDVAVEKLLARGYKV
GRIEQMESADQAKSRGSNSVILRKLVHVSTPSTVGDSNIGADAVHLLSLKEITLASNGSR
VYGFAFLDYAALKIWVGSVHDDDTFAALGALLVQVSPKEIIYETSGLSKETHRLIKKYAS
AGSVKMQLTPLYGLYFSDVSEIQTLIDSRGYFKASTSSWLSALNSSVNKDAVICALGGLV
SHLTRLMLEDALKNGEVLAYHVYRTCLRMDGQTLVNLEIFSNNFDGGSSGTLYKHLNHCI
TPCGKRLLRRWICHPLKDIDAINERLDIVEGFIQNCGLGSVTLEHLRKVPDLERLLGRVK
STVGLSSAVLLPFVGEKILKRRIKTFGMLVKGLRVGIDLLDILQRQDHGISALSKAVDIP
TLSSLGELIHHFEEAIDDDFPRYQDHSVKDDDANTLAMLVDLLVGKASEWSLVINALSTI
DVLRSFAAMALSSFGTTCRPNILLKGKAPVLQMKGLWHPYAFAESVNGLVPNDLSLGQNL
SGQNRFALLLTGPNMGGKSTIMRATCLAIVLAQLGCYVPCQSCELTLADAIFTRIGAMDR
IMSGESTFLVECTETASILENATEDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEAVRCR
LLFATHYHPLTKEFASHPHVTLQHMACMLKPRNGGDGGEKELTFLYRLTSGACPESYGLQ
VATMAGLPRSIVERASAAGEMMRSKIAGNFRSSEERAEFSTLHEEWVRTIVAIGGVKDAH
LDEDTMDTLFCVFHELKAHFRKRR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgcagccgcggcggcggcagcagcagcagcagtcgatcctctccttcctccagaagaag
ccggcggcggcggcgggggaggagggcgcgacgcccgagaggcccccgcggcctcccgcc
gcgtcggtcgcggggatcatggagaggctcgtgcggccgccgcggcagcagcagcagggg
agagaccaggatgcttcccaggctagacatgtggagcagagagccttacctgtgaaaaat
caaactacttcaaatgagtgctcaagtgcattgttcttagaatcttgcaatgctggagat
aacaaagcagccatgttgattgcagaagaaggttcgaatatgactcctttgcaggagccc
ctgaagtccttatggccttccaaagatgactttgttagagcaagcacactgtccccggaa
cttggtttatatcaaaatcttccaccgcattgtccaaagaagttaccctttgagtcttcc
aataataactgcattggagctaattcatcatttgaagagtttgacgtacaaactcctcag
gatacttcaaaaacagtcttctggagatcttctcgtggagctgatacacctttaacagaa
tctgattcagatcaaactcctttgcagcatccatcaaagttctcatttgtatctcctaat
ggtgaatatgtccggggcgctacactgtttgcacttgattccaattatactcctagacga
gaatcctcagagaagcttagttctgggccttcagaccttccatacattaaagcaacaaaa
ttatttacagaatttgattcaaatggaacaccatcacagaaccatctgaaaaagttatcc
tcagtgcctaagaatgacaaacgcattggagcaggtgctgaactattttcggaatttgat
ccgagtcccctgaaaccagaaacaccagtgatgcgagcagtaattcctcgtctgaagcgg
gttcaagaagatcaacgtgtgactaccaacgactcatgctctcctttctggggtccaaac
aagaaggtgaaaccagctcagtgttctccagttgagaataaggtccatgatgaaatggct
gaaagtgcacgcagcaagtttgagtggctgaatccttcgaatatcagagatgcaaataga
aggcggctggcagacccactttatgataagacaactctttttattccacctgatgcattg
agaaagatgtctacatctcaaaagcaatattggaatattaagtgcaagtatatggatgtt
gttttgtttttcaaagtgggaaaattctatgagctctatgaggtggatgctgagattggc
caaaaggaacttgactggaaaatgactatcagtggggtgggaaagtgccggcaggttggc
atttcagaaagtgggatagatgttgccgttgaaaagcttttagctcgagggtataaagtt
ggcagaattgaacaaatggaatctgcagaccaagccaaatctagaggatcaaattcggtt
attctaagaaaattggttcatgtatccacaccatcaacagtaggggacagcaacattggg
gctgatgctgttcaccttctttcactcaaagagattacactagcttcaaatggttcccgg
gtctatggatttgcatttttagattatgctgcacttaaaatttgggtgggttcagtccat
gatgatgatacatttgcagctttgggggctctgctggtgcaggtctctccgaaagaaata
atctatgaaacctcaggcctttcaaaagaaactcatagattaattaagaaatatgcttca
gcaggttctgtgaaaatgcagctgaccccactatatgggttatatttctctgacgtttca
gaaattcaaacgttaatagattctagaggatactttaaagcgtcaacaagttcatggtta
tctgcattgaattcttcagtgaataaagatgcagttatttgtgcactcggtggacttgtg
agccatttaactagacttatgctagaggatgctctgaaaaacggggaggtcttagcctac
catgtatacagaacatgtctaagaatggatggtcagactcttgtgaaccttgagattttc
agcaacaactttgatggtggttcatcaggtaccttatataagcacctcaatcactgcata
actccatgcggtaagcggcttctaagaagatggatttgccacccactaaaagatattgat
gctatcaatgaaaggctcgacattgttgagggcttcattcaaaattgtgggctaggatct
gttacactagagcatctacgtaaagtccctgatctcgagaggttactaggacgagtaaaa
tccactgttggtttatcatctgcggttctgttgccctttgttggagaaaagatattaaaa
agaaggataaaaacgtttggcatgcttgtcaagggcctccgtgttggaattgacttacta
gacatcctacaaagacaagatcatggcatctcagcattgtcaaaggctgtggatattcca
acattgagctcccttggtgaattaattcatcattttgaagaggcaatagatgatgatttt
ccaagataccaggatcatagtgtcaaagacgatgatgcaaacactttggctatgctagtg
gatcttttagttggaaaagcttctgaatggtctctagtgatcaatgctctgagcactatc
gatgtgcttaggtcctttgcagccatggcattgtcgtcatttggcacaacgtgcagaccg
aacattctgctgaaaggaaaagcgcctgtacttcagatgaagggtttatggcatccttat
gcttttgcagaaagtgtaaatgggttggtaccaaatgatctatctcttggtcagaattta
tctggccaaaatcgctttgcattgttgttgactggtccaaatatgggcgggaaatctaca
ataatgcgtgccacctgcctagctattgtgcttgcccagctcggctgttatgttccctgt
cagtcatgcgagttgacacttgcagatgccatatttacacggattggtgcaatggatcgg
attatgtctggagaaagtacctttcttgtcgaatgcactgagactgcatctattcttgag
aatgcaaccgaggattctctcgtcttgcttgatgagcttggcagaggaactagcacattt
gatggatatgcaattgcatatgcagtattccgacaccttgtcgaagcggtccgatgccgt
ctgctcttcgcaactcactaccatcctctcaccaaggagttcgcctctcacccccacgtc
acccttcagcacatggcctgcatgctgaagccaagaaacggcggcgacggcggcgagaag
gagctcaccttcctctaccggctcacctcgggcgcctgcccggagagctacggcctgcag
gtcgccaccatggcagggctcccgaggtcgatcgtggagagggcgtcggccgccggcgag
atgatgaggtcgaagatcgccgggaacttcaggtcgagcgaggagcgtgcggagttctcg
accctccatgaggagtgggtgaggacgatcgtggcgatcggcggcgtgaaggacgcgcac
ctggacgaggacaccatggacacgctgttctgcgtcttccatgagctgaaggctcacttc
aggaaacggaggtga

DBGET integrated database retrieval system