Oryza sativa japonica (Japanese rice): 4325404
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Entry
4325404 CDS
T01015
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1
KO
K27807
short internodes/stylish family transcription factor
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4325404
Transcription factors [BR:
osa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
4325404
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GFIT
Motif
Pfam:
DUF702
DUF7500
Motif
Other DBs
NCBI-GeneID:
4325404
NCBI-ProteinID:
XP_015622050
UniProt:
Q7EZZ4
Q941Y5
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Position
1:complement(join(42689537..42689922,42690010..42690646))
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AA seq
340 aa
AA seq
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MADVGMVVVTPAASFHHTHHHHHHHEAAAAAAAAAAAAADPIFPLLSAGPCVLDPDKSAA
SGSAIQFWQPPPQLPSSAAGGNPNPSSSAFPYLKKPLPMLDTGGGSSGSGGAATCQDCGN
QAKKDCGHQRCRTCCKSRGFDCSTHVKSTWVPAARRRERQQLTGSASSSPATASAAAASK
KPRLLTSQTTTSHTSTSNATTPRSFDTTSSHQDASFRESLPRQVRAPAVFRCVRVTSIDD
GEDEYAYQATVTINGHVFKGFLYDQGVDDGRGLAATSNDDSTAGGVPNISELHLGGASIS
GNAMREGGSSMVHSDLYGGGGGSGGGPHILGGSSYGNTMN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcgggatggtcgtcgtcacccccgccgcctccttccaccacacacatcac
caccaccaccaccacgaggccgccgccgctgccgccgccgcggcggcggcggccgccgat
cctatcttcccgctgctctccgccggcccctgcgtgcttgatccggataagtcggcggcg
tcgggcagcgcgatccaattttggcagccgccgccgcagctgccgtcatcggcggcgggt
ggtaaccctaaccctagctccagcgccttcccctacctcaagaagcccctcccgatgctc
gacaccggcggcggatcgtccggctccggcggcgcggcgacgtgccaggactgcggcaac
caagcgaagaaggactgcggccaccagcgctgccgcacgtgctgcaagagccgcggcttc
gattgctccacccacgtcaagagcacctgggtgcccgccgctcgccgccgcgagcgccag
cagctcaccggctccgcctcgtcttccccggcaaccgcctccgccgcggccgcctccaag
aagccccgccttctcacctcccaaaccacgacgtcgcacacctccacctccaacgccacc
acgccccgcagcttcgacaccacctccagccatcaagacgcgtcgtttagggagagcttg
ccaaggcaggtgcgcgcgccggcggtgttcaggtgcgtgcgcgtgacgtccatcgacgac
ggcgaggacgagtacgcgtaccaggcgacggtgaccatcaacgggcacgtgttcaagggg
ttcctgtacgaccagggagtcgacgacggccgcggcctcgccgccacgagcaatgacgac
tcgacggccggcggcgtgcccaacatctccgagctccacctcggcggggcctccatttcc
ggcaatgccatgagagaaggcggctcctccatggtgcactcggacttgtacggcggcggc
ggcggcagcggcggaggcccgcacattctcggcggatcgagctatggtaacaccatgaac
tga
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