| Entry |
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| Name |
(RefSeq) DNA damage-binding protein 2-like
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| KO |
| K10140 | DNA damage-binding protein 2 |
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| Organism |
osa Oryza sativa japonica (Japanese rice)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4325482
09124 Replication and repair
03420 Nucleotide excision repair
4325482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:osa04121]
4325482
03400 DNA repair and recombination proteins [BR:osa03400]
4325482
Ubiquitin system [BR:osa04121]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
4325482
DNA repair and recombination proteins [BR:osa03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
4325482
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(join(2258911..2259142,2259226..2259422,2259514..2259762,2259854..2259983,2260280..2260371,2260542..2260662,2260747..2260835,2260956..2261078,2261186..2261313,2261864..2261954,2262508..2262807))
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| AA seq |
583 aa
MGPTTRARFVHNRRRRRRRGPYAAPDDDDEEEDQQEASSSSSSSDEGEEDAEEEGSGEVD
DDDGEAAEPSGKEEEVSPVAAAARSGRKASITISLKKVCKVCKSTGHEAGFKGAVYIDCP
RKPCFLCKMPGHTTLTCPHRVAMEHGVIPASRRNTNTSLDYVFQSQVKGKIPMVKPQFLI
PNQLECGNIKFHQRRVTCLEFHPTKNNVLLSGDKKGLLGVWDYVKLHEKITYDSVHSCIL
NSMKFDTTNDGLLYTASSDGTISSTDLDTGIGSSLLNLNPNGWNGPSTWRMIYGMDFNSD
KGLLLVADSFGFLHLLDRRLKARIGDPILIHKKGSKVTSLHCNPAQPEVLLSSGNDHYAR
IWDTRKLEPNSAFVSLAHGRVVNSGYFSPQSGNKILTTCQDNRIRVWDYIFGNLESPSRE
IVHSHDFNRHLTPFKAEWDPKDHTETVAVIGRYISENYNGIALHPIDFIDTSTGKLLAEV
MDPDITTISPVNKLHPRDDILASGSSRSIFIWKPKTESDATEERNREKAKEFVYGSGSRK
KSNGKHENSSDDDSDGSCDGKKKKKAKKTRFTHTIKGKGKSKV |
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| NT seq |
1752 nt +upstreamnt +downstreamnt
atgggccctaccacccgcgcccgcttcgtccacaaccgccgccgccgccgccgccgcggg
ccgtacgccgcccccgacgacgacgacgaggaggaggaccagcaggaagcctcctcgtct
tcctcatcctccgacgagggagaggaggatgctgaggaggagggctccggagaagtcgat
gacgatgatggcgaagcggcggaaccctcgggtaaggaggaggaggtgtcccccgtggct
gcggcggcgaggagcgggaggaaggcctcgatcacaattagtctcaagaaagtgtgcaag
gtttgcaagagtacagggcatgaggccgggtttaagggagcagtgtatatcgattgcccc
aggaagccttgtttcctatgcaagatgccaggccatacaaccttgacatgcccacataga
gtagcaatggagcatggtgttatcccggcctctagaaggaacacaaacacttcactggat
tatgtgtttcagagccaagttaaaggcaagattcccatggttaagcctcagtttctgata
cccaatcaactggagtgtgggaacataaaatttcaccagaggcgtgtgacctgcttggaa
ttccatccaactaagaataatgtgcttttatcaggagacaagaaaggactattaggtgtt
tgggattacgtcaagttgcatgagaagattacttatgattctgtgcattcttgcattctc
aacagcatgaagtttgacactaccaatgatggattactatatacagcctcttctgatggt
actataagtagcacagacttggacactggaattggctcctctctgctgaatttaaatcca
aatggctggaatggtccgagcacttggcgcatgatttacgggatggactttaactctgac
aaaggtcttcttttggtggcggatagcttcggttttcttcacttgctggatagacggttg
aaggcaagaattggagatccaattcttatacataaaaagggtagcaaggttaccagcctc
cactgtaaccctgctcagcctgaagttcttctaagcagtggaaatgatcactatgcccgt
atttgggatacaaggaagctggagcccaactctgcctttgtgagccttgctcatggaaga
gttgttaattcaggatatttttccccacaaagtgggaataagatcttgacaacatgtcag
gataatcgaatccgtgtatgggattatatttttggtaatctggaatccccaagtagagag
attgttcacagccatgacttcaatcgtcacttgactcccttcaaagcagagtgggatcca
aaggatcacacagaaacagttgcagttattggtcgttacataagtgaaaactacaatggg
attgctctacatcccattgatttcatagacaccagtactgggaagcttctggctgaggtg
atggaccctgacattacaactatcagcccggtgaacaagctacatccgcgagatgatatc
ctggcttcaggaagttcaaggtccattttcatttggaaaccaaagactgaaagtgatgct
actgaagagaggaacagagagaaggcaaaggaatttgtatatggatcaggcagccggaaa
aaatcaaatggcaagcatgagaatagcagtgatgatgactcagatggcagttgtgatgga
aagaagaagaagaaagcgaagaagactcgcttcactcataccataaaggggaagggcaaa
tccaaggtttga |
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