Oryza sativa japonica (Japanese rice) (RefSeq): 4325482
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Entry
4325482 CDS
T01015
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03420
Nucleotide excision repair
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4325482
09124 Replication and repair
03420 Nucleotide excision repair
4325482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4325482
03400 DNA repair and recombination proteins [BR:
osa03400
]
4325482
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
4325482
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
4325482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
4325482
NCBI-ProteinID:
XP_015622245
UniProt:
Q84KJ3
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All DBs
Position
1:complement(2250837..2255147)
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AA seq
583 aa
AA seq
DB search
MGPTTRARFVHNRRRRRRRGPYAAPDDDDEEEDQQEASSSSSSSDEGEEDAEEEGSGEVD
DDDGEAAEPSGKEEEVSPVAAAARSGRKASITISLKKVCKVCKSTGHEAGFKGAVYIDCP
RKPCFLCKMPGHTTLTCPHRVAMEHGVIPASRRNTNTSLDYVFQSQVKGKIPMVKPQFLI
PNQLECGNIKFHQRRVTCLEFHPTKNNVLLSGDKKGLLGVWDYVKLHEKITYDSVHSCIL
NSMKFDTTNDGLLYTASSDGTISSTDLDTGIGSSLLNLNPNGWNGPSTWRMIYGMDFNSD
KGLLLVADSFGFLHLLDRRLKARIGDPILIHKKGSKVTSLHCNPAQPEVLLSSGNDHYAR
IWDTRKLEPNSAFVSLAHGRVVNSGYFSPQSGNKILTTCQDNRIRVWDYIFGNLESPSRE
IVHSHDFNRHLTPFKAEWDPKDHTETVAVIGRYISENYNGIALHPIDFIDTSTGKLLAEV
MDPDITTISPVNKLHPRDDILASGSSRSIFIWKPKTESDATEERNREKAKEFVYGSGSRK
KSNGKHENSSDDDSDGSCDGKKKKKAKKTRFTHTIKGKGKSKV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgggccctaccacccgcgcccgcttcgtccacaaccgccgccgccgccgccgccgcggg
ccgtacgccgcccccgacgacgacgacgaggaggaggaccagcaggaagcctcctcgtct
tcctcatcctccgacgagggagaggaggatgctgaggaggagggctccggagaagtcgat
gacgatgatggcgaagcggcggaaccctcgggtaaggaggaggaggtgtcccccgtggct
gcggcggcgaggagcgggaggaaggcctcgatcacaattagtctcaagaaagtgtgcaag
gtttgcaagagtacagggcatgaggccgggtttaagggagcagtgtatatcgattgcccc
aggaagccttgtttcctatgcaagatgccaggccatacaaccttgacatgcccacataga
gtagcaatggagcatggtgttatcccggcctctagaaggaacacaaacacttcactggat
tatgtgtttcagagccaagttaaaggcaagattcccatggttaagcctcagtttctgata
cccaatcaactggagtgtgggaacataaaatttcaccagaggcgtgtgacctgcttggaa
ttccatccaactaagaataatgtgcttttatcaggagacaagaaaggactattaggtgtt
tgggattacgtcaagttgcatgagaagattacttatgattctgtgcattcttgcattctc
aacagcatgaagtttgacactaccaatgatggattactatatacagcctcttctgatggt
actataagtagcacagacttggacactggaattggctcctctctgctgaatttaaatcca
aatggctggaatggtccgagcacttggcgcatgatttacgggatggactttaactctgac
aaaggtcttcttttggtggcggatagcttcggttttcttcacttgctggatagacggttg
aaggcaagaattggagatccaattcttatacataaaaagggtagcaaggttaccagcctc
cactgtaaccctgctcagcctgaagttcttctaagcagtggaaatgatcactatgcccgt
atttgggatacaaggaagctggagcccaactctgcctttgtgagccttgctcatggaaga
gttgttaattcaggatatttttccccacaaagtgggaataagatcttgacaacatgtcag
gataatcgaatccgtgtatgggattatatttttggtaatctggaatccccaagtagagag
attgttcacagccatgacttcaatcgtcacttgactcccttcaaagcagagtgggatcca
aaggatcacacagaaacagttgcagttattggtcgttacataagtgaaaactacaatggg
attgctctacatcccattgatttcatagacaccagtactgggaagcttctggctgaggtg
atggaccctgacattacaactatcagcccggtgaacaagctacatccgcgagatgatatc
ctggcttcaggaagttcaaggtccattttcatttggaaaccaaagactgaaagtgatgct
actgaagagaggaacagagagaaggcaaaggaatttgtatatggatcaggcagccggaaa
aaatcaaatggcaagcatgagaatagcagtgatgatgactcagatggcagttgtgatgga
aagaagaagaagaaagcgaagaagactcgcttcactcataccataaaggggaagggcaaa
tccaaggtttga
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