Oryza sativa japonica (Japanese rice): 4325622
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Entry
4325622 CDS
T01015
Symbol
GL2-9, roc9
Name
(RefSeq) homeobox-leucine zipper protein ROC9
KO
K09338
homeobox-leucine zipper protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4325622 (GL2-9)
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
4325622 (GL2-9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
CiPC
Motif
Other DBs
NCBI-GeneID:
4325622
NCBI-ProteinID:
NP_001388397
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All DBs
Position
1:complement(join(32611273..32611686,32611769..32611855,32611936..32612225,32612311..32612485,32612571..32612783,32612868..32612969,32613059..32613463,32613563..32613775,32613881..32613998,32614243..32614508,32614615..32614683))
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AA seq
783 aa
AA seq
DB search
MGTNRPRPRTKDFFAAPALSLTLAGVFGRKNGPAASGGDGVEEGDEEVQAAGEAAVEISS
ENAGPGCRQSQSGGGSGEDGGHDDDDGEGSNKKRRRKNYHRHTAEQIRIMEALFKESPHP
DERQRQQVSKQLGLSARQVKFWFQNRRTQIKAVQERHENSLLKSELEKLQDEHRAMRELA
KKPSRCLNCGVVATSSDAAAAATAADTREQRLRLEKAKLKAEIERLRGTPGKSAADGIAS
PPCSASAGAMQTNSRSPPLHDHDGGFLRHDDDKPRILELATRALDELVGMCSSGEPVWVR
GVETGRDILNYDEYVRLFRRDHGGSGDQMAGWTVEASRECGLVYLDTMHLVHTFMDVDKW
KDLFPTMISKAATLEMISNREDDGRDGVLQLMYAELQTLTPMVPTRELYFARYCKKLAAE
RWAIVDVSFDESETGVHASSAVRCWKNPSGCLIEEQNNGRCKMTWVEHTRCRRCTVAPLY
RAVTASGVAFGARRWVAALQLQCERMVFAVATNVPTRDSTGVSTLAGRRSVLKLAHRMTS
SLCRTTGGSCDMAWRRAPKGGSGGGGDDDIWLTSRENAGDDPGEPQGLIACAAASTWLPV
NPTALLDLLRDESRRPEWDVMLPGKSVQSRVNLAKGKDRTNCVTAYAARPEEEEERGGKW
VLQDVCTNPCESTIAYAAIDAAALQPVIAGHDSSGVHLLPCGFISVMPDGLESKPAVITA
SRRGGEASGAGSLVTVAFQVPASPSAAAATLSPDSVEAVTVLVSSTLRNIRKALGCDSCE
EEF
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggggaccaaccggccgcggccacgaaccaaggacttcttcgcagctccggcgctctcc
ctcacactggcaggcgtgttcggccggaaaaatggacctgcggcgtcgggtggagacggg
gtggaggaaggcgacgaggaggtgcaggctgcaggcgaggcggcggtggagatcagcagc
gagaacgcggggccggggtgtagacagtcccagtccggcggtggctccggggaagacggc
ggccatgacgacgacgacggagagggtagtaataagaagaggaggaggaagaactaccac
aggcacaccgccgaacaaatcaggatcatggaagcgctattcaaagagtccccacatccg
gatgagaggcagcggcagcaggtcagtaagcagctcggcctctctgcacgccaggtcaag
ttctggtttcagaaccgacgaactcagatcaaggcggttcaggagcgacacgagaactcg
ctgctcaagtccgagctggagaagctccaggacgagcaccgcgcgatgagagagctcgcc
aagaagccatctcgctgcctaaactgcggcgtcgtggcaacctccagcgacgccgccgcc
gccgccacggcggcggacacccgtgaacagcggctgcgactcgagaaagccaagctcaaa
gctgagatagagaggctgcgagggacgccaggaaagtccgccgccgatggaatcgcctcg
ccgccgtgctccgcgtccgcgggcgccatgcagacgaacagcaggagcccgccgttgcac
gaccacgacggcggcttcttacgccacgacgacgacaagccgaggatcttggagctggcc
acccgtgcgctggacgagctggttgggatgtgctcctccggcgagcctgtgtgggtgcgg
ggcgtcgagaccggcagggacattctgaactacgacgagtacgtgcgcttgttccgccgc
gaccacggtggttccggcgatcagatggccggctggacggttgaggcttccagggaatgt
ggactagtttaccttgacacgatgcatcttgtgcacactttcatggacgtggacaagtgg
aaggacctattccctaccatgatctcaaaggcagcgacgctggaaatgatcagcaaccgc
gaagacgatggccgagacggcgtcctgcaactgatgtatgcagagcttcagacactgaca
ccaatggtgcccacgagggagttatacttcgcccgctactgcaagaagctggccgcggag
agatgggcgatcgtcgacgtgtccttcgacgagtctgagactggcgtccacgcgtcgtcg
gcggtcaggtgctggaagaacccatccggctgcctcatcgaagagcagaacaacggccgg
tgcaagatgacctgggtggagcacaccagatgccgccggtgcacggtcgcgccgttgtac
cgggcggtcaccgcgagcggcgtggcgttcggcgcgagacgctgggtggccgcgctccag
ctccagtgcgagaggatggtcttcgccgtggcgaccaacgttccaacgagggactcgacc
ggggtctccacgctcgcgggcaggaggagcgttctgaaactggcgcaccggatgacgtcg
agcctctgccgcaccaccggtggatcgtgtgacatggcgtggcgcagggcgccgaaagga
ggcagcggcggcggtggcgacgacgacatctggctgacgtcccgggagaacgccggcgac
gaccctggcgagccgcaggggctgatcgcgtgcgccgcggcgtcgacgtggctgccggtg
aatccgacggctctcctcgacttactgagggatgaatcacggcgaccagagtgggacgtg
atgctacccggaaaatctgttcagagccgcgtgaatcttgcaaaggggaaggaccgtacc
aactgcgtcaccgcctacgccgctcgaccggaagaagaagaagagagaggcggcaagtgg
gtcctccaggacgtctgcaccaacccctgcgagtcgacgatcgcgtacgcggcgatcgac
gccgccgcgctgcagccggtcatcgccgggcacgactcgagcggcgtgcacctcctgccg
tgcggattcatctcggtgatgccggacgggctcgagtccaagccggcggtgatcacggcg
tcgaggaggggaggcgaggcttcgggggccggatcgctggttaccgtggcgttccaggtc
ccggccagcccgtcggcggcggcggccacgctctcgccggactcggtggaggccgtgacg
gtcctggtctcctccactctgcgtaacatcaggaaagccttggggtgcgactcgtgcgag
gaggaattctag
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