Oryza sativa japonica (Japanese rice): 4325717
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Entry
4325717 CDS
T01015
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 3
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
4325717
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
osa01007
]
4325717
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
osa03016
]
4325717
Enzymes [BR:
osa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
4325717
Amino acid related enzymes [BR:
osa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
4325717
Transfer RNA biogenesis [BR:
osa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
4325717
Prokaryotic type
4325717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
Desulfoferrodox
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
4325717
NCBI-ProteinID:
XP_015621402
UniProt:
A0A0P0V2L3
Q93WM3
LinkDB
All DBs
Position
1:complement(join(15420353..15420536,15420989..15421047,15421337..15421466,15421554..15421804,15421938..15422531,15423356..15423817))
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AA seq
559 aa
AA seq
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MAEDAAAAAMAAASLSDDLEPATDRTRIRSILADGAARAGERVVVGGWVKTGREQGKGTF
AFLELNDGSCASNLQVLVDAAVHPLAPLTATGTSVLVEGELKKPPEGAKQRVELRVDRVI
EVGEVDPAAYPLPKTKLTLENLRDVVHLRSRTNTIGAVARIRHQLACATHRFFDENGFLY
VHTPIITTSDCEGAGEMFQVTTLFSHAEKVEKELKENPAPSESDIEAARVVVKEKGDAVA
QLKAAKASKQEITAAVAELNKAKENVSRLEERSKLKPGIPYRDDGTVAYENDFFKRQAFL
TVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFANLQDDMNCAER
YVQYLCKWLLEHCREDMEFMVKNYDKTAIERLELVSSTPFQRISYTKAVELLKNVTDKKF
ENKVEWGIDLASEHERYLTEVIFKKPVIVYNYPKEIKAFYMRLNDDQKTVAAMDVLVPKV
GELVGGSQREERLDLLKTRIQDAGLPLEPYEWYLDLRRFGSVKHSGFGLGFERMILFATG
LENIRDVIPFPRYPGRADL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagacgccgcggcggccgccatggccgcggcctccctctccgacgacctggag
cccgccaccgaccgcacccgcatccgatccatcctggccgacggcgccgcgcgcgccggc
gagcgcgtcgtcgtgggcgggtgggtcaagaccgggcgggagcaggggaaaggcaccttc
gccttcctcgagctcaacgatggctcctgcgcctccaacctgcaggtcctcgtcgacgcc
gccgtccacccgctcgcgccgctcaccgccacgggcacgtccgtgctcgtcgagggcgag
ctcaagaagccgccggagggcgccaagcagcgcgtcgagctccgcgtcgaccgcgtcatc
gaggtcggcgaggtcgaccccgccgcctacccgctgcccaagaccaagctcacgctcgag
aatctcagggacgtcgtccatctccgctcccgcaccaacacgattggtgctgttgcgcgt
attagacaccagctagcctgtgcaacacacaggttttttgatgagaatggttttctttat
gtgcacacaccaataataactacaagtgattgtgagggtgctggtgagatgtttcaagtg
acgactttgttcagccatgctgaaaaggtggagaaggaattgaaagagaaccctgcacca
tcagagtctgatattgaggcagctagagttgttgtcaaggaaaaaggtgatgcggttgca
cagcttaaagctgcaaaagctagcaaacaagaaatcacagctgctgttgctgagcttaac
aaggcaaaagaaaatgtctcaaggctggaggaaagatctaagttgaagcccggaattccg
tacagagatgatgggacagtagcttatgagaatgacttcttcaaacgccaggcttttctg
actgtgtctggacagcttcaagttgagacctatgcatgtgctcttagcagtgtttatacc
tttggaccaacattccgtgcagaaaactcccatacatcacgacatttggcagagttttgg
atggttgaaccagaaatcgcatttgctaacttgcaggatgatatgaactgtgcagaaaga
tatgtacagtacctttgcaagtggcttcttgagcattgccgggaagacatggaattcatg
gtgaaaaattacgataagactgcaattgagcgtctggagcttgtttcctcgacacctttt
cagcgcatttcatatacaaaagctgttgagctattgaaaaatgtcactgataagaaattc
gaaaacaaggttgaatggggaattgatttagcttcagagcatgaaaggtatttaaccgag
gtgatatttaagaagccggtgattgtttataactatcccaaagaaataaaggcattttat
atgagactcaatgatgatcagaagactgtagctgctatggatgttcttgtgcccaaggtt
ggtgagttggttggtggaagccaaagggaggaacgtctggaccttctcaaaacaaggata
caagacgccgggttgcctttggagccatatgaatggtacttggacctccgccgctttgga
tctgtcaagcacagtggttttggtttgggttttgaaagaatgattctttttgccactggt
ttggagaacatcagagatgtcatccccttccctagatacccagggagggctgatctctaa
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