KEGG   Oryza sativa japonica (Japanese rice): 4325820
Entry
4325820           CDS       T01015                                 
Name
(RefSeq) protein HASTY 1 isoform X1
  KO
K14289  exportin-5
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    4325820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4325820
   03036 Chromosome and associated proteins [BR:osa03036]
    4325820
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    4325820
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     4325820
SSDB
Motif
Pfam: Exportin-5 Xpo1 CCSMST1
Other DBs
NCBI-GeneID: 4325820
NCBI-ProteinID: XP_015611561
UniProt: Q5ZDB2 A0A979HKN4
LinkDB
Position
1:join(14855734..14855841,14856551..14856652,14857549..14857692,14857798..14857878,14857970..14858039,14858159..14858229,14858319..14858482,14858561..14858632,14858729..14858966,14859341..14859403,14859486..14859761,14860750..14860863,14860991..14861117,14861207..14861376,14861635..14861733,14864633..14864736,14864844..14865141,14865269..14865501,14865738..14866238,14866314..14866608,14866881..14867064,14867474..14867556)
AA seq 1198 aa
MAADPAVASAVAAISAVMDWRSSPDARSAAFAYLESVKTGDVRALANTSFLLVRKDQSSE
VRLHGFKMLQHLVRLRWEELSVAERNEFANLTVNLIPEVVGPHEEWALKSQTAALVAEVV
RREGVALWNTLLPSIVSLSNNGPIEAELVAMILRWLPEDITVHNEDLEGDRRRALLRGLT
ESLPQILPLLYSLLEKHFVAALSAHTNQQMELAKQHVGTITAVLNAANAYAEWAPVTDLA
KYGLIHGCGSLFSYSDFRLHACEFFKIICQRKRPLDVAIVEYDAAMSNIFQLLMNIAQDF
LVRSKMQPNVIDVNEYEFAMCICETMVALGSSNMQCILADVARTLHFLQQMLEYYQHYKI
TLHFQSLLFWLVVLREPSKAKSVARVSSDTPAAGNSASTGGGSTEREKKGVSVLITDEMY
STILDVTFKRMLKKSTSASSGLLELWSEELEGKSDFCNYRAKLLDLIKVIASQRPGITAT
SIVQRINIVFGDANEATKSSQDLDAMEGAQLGLEAVVSAIFDGSSDYSKIDQDTKFQIHR
IFEGLLQQLLSLKWSQPNLAVIHGHYLDSLGPFLRHYPDAVACIVNKLFEILTSLPITIQ
DPSNNFRQARLQICSSFIRISRAADKALLPHMKNIADTMAYLQGEGRLLRAEHNHLCEAF
LVMASSAGIQQQQEVLAWLLEPINKMWTQVEWQNAYLSDPSGLTHMFADSQFMWSIYHNI
TLFEKALKRGGSKKSASAPQALATTVVTANLHPMCSHLPWILPPLLRLLRCIHMLWAEPF
SQSLAGEVKAAKSMTVAEQTSLLGETNKLTKGQVASADGLLDVQREGESKENTIRNWLRG
IRDSGYNVIGLSASLGDPFFRCIEGSSITAALMENVQAMEFRHLRQLIHLVIIPLVKYCP
PELWRMWISNLLQPLFVHCQQALDFSWSSLLREGRAKVPDNFGNLSGSDLKVEVMEEKLL
RDLTREVCSVLWVLASPGLNSGLPSLEQLGPANRINSSLKDLELFVSSSITGFLMLNVST
AVPALRITVEVFSWTDSEAVTKIIPFCGALIHLAVATNRAELSQFVAKDLFSSILHGLSV
ELNSITSSELVGLCREIYIYLSDRDPAPRQVLLSLPHMKQEDLLAFDESLSKTASPKDQK
LLMRSLLLLASGNKLRALVGQKATNVITNVTTRNRSSAARHGLSAEEDDHIGLAALSS
NT seq 3597 nt   +upstreamnt  +downstreamnt
atggcggccgaccccgccgtagcgtccgccgtggcggcgatctccgccgtgatggactgg
cgctcctcccccgacgcccgctccgccgccttcgcgtacctcgaatcggttaagacagga
gatgtccgggcattggcgaacacatcatttttattggtccgaaaggaccagtcttcagag
gtccgactgcatggtttcaaaatgttgcagcacttggtgagattgagatgggaggaactc
agtgttgcagaacgaaatgaatttgctaatttgactgttaatttgatacctgaggttgtt
ggtcctcatgaggagtgggctttgaagagtcaaacggctgcattagtagcagaggtagtt
agaagggagggagttgctttgtggaatactttactcccatctattgtttcgttgtcaaac
aatggtcctattgaggctgagttagttgccatgattctgaggtggcttccagaggatatc
actgttcacaatgaggatttagaaggtgatagacgtagggcattgttacgtggtcttact
gagtcgttgccacaaatcctgccgctgttatattctctacttgagaaacactttgtagct
gctttgagcgcgcacacgaatcagcaaatggagttggctaaacaacatgttgggacaata
actgctgtgctgaatgctgccaatgcatatgctgaatgggctcctgtgacagatctcgcc
aaatatggtttaattcatggatgtggatccttgttttcttacagtgattttcgtctccat
gcttgtgaattctttaaaattatatgccagaggaaacggcctttggatgtcgcgattgtg
gagtatgatgcagcaatgagcaacattttccagttgttgatgaacattgcacaagatttt
ttagtgagatccaagatgcagcccaacgttattgatgttaatgaatacgagtttgcaatg
tgtatttgtgagacaatggttgctctcggttcttctaatatgcagtgcatactagctgat
gtagcaaggactttgcacttcctacaacagatgctggaatattatcaacactacaagatc
acgcttcatttccaatctttattattttggctggtggtcttgagagaaccatcaaaagct
aagtctgttgcacgtgtttctagtgacacccctgctgccggtaattctgcatctactggt
ggtggttcaactgaaagggagaagaaaggggtgtcagtattaatcactgatgaaatgtac
agtacaattttggatgttacgttcaaaagaatgcttaaaaaaagtacgagtgcatcttca
gggctgttagaactatggagtgaagagctagaggggaagagtgacttctgcaactaccgt
gccaagctgctggatctcataaaagtcattgcatctcaaaggcctggtattacagcaaca
agcattgtacagagaataaacattgtatttggagatgctaatgaagcaacgaaatcatcc
caggatcttgatgcaatggaaggtgcgcagctggggctggaagcagttgttagtgctata
ttcgatggctcatctgattattcaaagattgaccaggacacaaaattccaaattcacagg
atctttgaaggcttacttcagcagcttctttctttaaagtggtcacaaccaaatcttgct
gttattcatggtcactatttggattctttgggtcctttcttgagacattacccagatgca
gttgcctgtattgtgaataagctttttgaaatattaacatctctccccatcacaattcag
gacccttcaaataatttccgtcaagctagactgcagatctgctcatcattcattcgtata
tcaagagctgctgataaagcacttctgcctcacatgaagaacattgctgatacaatggct
tatcttcaaggagagggtcgcttactacgtgctgagcataaccacctctgtgaagcgttt
cttgtcatggcatcctctgcagggattcaacagcaacaggaagtcctggcttggttacta
gaacctatcaacaaaatgtggacgcaagtggaatggcaaaatgcatacttgtctgaccca
tctggcttgacacacatgtttgctgacagccaatttatgtggtcaatttatcacaacatc
acattatttgagaaggcactcaagaggggtgggtccaaaaaatctgcatcagctccacaa
gcactggccacaacagtggtaactgctaatctgcatccaatgtgttcacatctaccatgg
attctgccccctctgttaaggctgttgcgatgcatacatatgctttgggccgagcccttt
tctcagtctctggcaggagaagtcaaagcggcaaaaagcatgactgtggcggagcagacc
agccttcttggggagacaaataaactcaccaaaggccaggttgcatctgctgatggattg
ttggatgttcaaagggagggagagtctaaggaaaacaccataaggaactggttacgcggg
atccgtgacagtgggtacaatgttataggactatcggctagtcttggggatccatttttc
cgatgcatagagggttcctccatcactgctgctcttatggagaacgtgcaagctatggaa
tttcggcatttgcgccaacttatccaccttgttattattcctttggttaaatattgccct
cctgaactgtggcggatgtggatatcgaaccttttacagccattatttgtccattgtcag
caagctcttgatttctcttggtccagtcttcttcgtgagggccgggctaaggttcctgat
aattttggtaatctttctgggtcagatctgaaggtagaggtaatggaagagaaattgctt
agagacttgactcgtgaagtatgttccgttctttgggttttagcatcaccaggcttgaat
agtggtcttccatccttagaacaacttggacctgccaaccggattaattcttctcttaag
gatctggagttgtttgtttccagctctatcactggatttcttatgcttaatgtctccact
gctgttcctgcattgaggataactgttgaagtgttcagttggacagatagtgaagcagtc
acaaaaattattcctttttgtggtgcattgattcaccttgctgttgcaacaaatcgggct
gagttgagtcagtttgttgcgaaagatctattttcttccatattacatggcttatctgtt
gagttgaattccattacgagttcagaacttgttggactttgtcgagaaatatatatctat
ctctcagatagagatcccgcacctagacaggttcttctgtccctcccacacatgaagcag
gaagatttgctagcctttgatgagtctttgagcaaaactgcaagtccaaaagatcaaaag
ctacttatgcgaagcttacttttgcttgcttcagggaacaaattgagagctcttgttggt
caaaaggctactaatgttattaccaacgttacaactcgaaaccggagctctgctgcacgc
catggacttagtgctgaggaagatgaccacattggattagctgcactatcatcatag

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