KEGG   Oryza sativa japonica (Japanese rice): 4325946
Entry
4325946           CDS       T01015                                 
Name
(RefSeq) ras-related protein Rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04142  Lysosome biogenesis
osa04144  Endocytosis
osa04145  Phagosome
osa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    4325946
   04145 Phagosome
    4325946
   04142 Lysosome biogenesis
    4325946
   04148 Efferocytosis
    4325946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4325946
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4325946
   04031 GTP-binding proteins [BR:osa04031]
    4325946
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    4325946
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4325946
  Exosomal proteins of other body fluids (saliva and urine)
   4325946
  Exosomal proteins of colorectal cancer cells
   4325946
  Exosomal proteins of bladder cancer cells
   4325946
GTP-binding proteins [BR:osa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    4325946
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_16 ATP_bind_1 Septin nSTAND3 AAA_22 AAA_7 G-alpha AAA_5 cobW PduV-EutP NTPase_1 DAP3 AAA_24 NACHT NB-ARC Sigma54_activat MCM nSTAND1 AAA_14
Other DBs
NCBI-GeneID: 4325946
NCBI-ProteinID: XP_015632387
UniProt: A0A0P0V7B6 Q5JLU1
LinkDB
Position
1:complement(join(30318851..30318917,30319763..30319908,30319978..30320058,30322431..30322577,30322674..30322773,30323133..30323159,30323321..30323376))
AA seq 207 aa
MSTSRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTL
QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFP
FILLGNKIDVDGGKSRVVSEKKAMEWCSSKGNIPYFETSAKEDRNVDSAFLSVAKLALEH
ERDQDIYFQTVVPDPVPEAEQRSGCAC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgtcgacgtcgcgcaggaggaccctcctcaaggtcatcgtcctcggcgacagcggggtg
gggaagacgtcgcttatgaaccaatatgttcacaagaagtttagccagcagtacaaagct
acaattggtgcggatttcgtcaccaaggaggtcctcattgaagataggctcgtgactctg
cagatctgggacactgcggggcaggagaggttccagagtcttggtgttgcgttttacaga
ggagcagattgttgtgtgctcgtctatgacgtcaattctaacaggtcatttgacacgctc
aacacatggcatgatgagttcctcaaccaagctagcccatcagatcccaaaacttttcca
ttcatcttacttgggaacaagattgacgtagatggagggaaaagcagagtggtttctgag
aaaaaagcaatggagtggtgttcatccaaaggcaatattccttattttgaaacttctgca
aaagaggaccgcaatgtcgacagtgcgttcttgtctgtcgctaagcttgctttagagcat
gagcgtgatcaggacatctacttccagacggttgttccagatcctgttccagaggctgaa
cagagaagtggatgtgcatgctag

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