Oryza sativa japonica (Japanese rice): 4325958
Help
Entry
4325958 CDS
T01015
Name
(RefSeq) amino acid transporter AVT1I
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
4325958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
osa02000
]
4325958
Transporters [BR:
osa02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
4325958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
DUF6867
Motif
Other DBs
NCBI-GeneID:
4325958
NCBI-ProteinID:
XP_066163029
LinkDB
All DBs
Position
1:join(24014099..24014887,24015445..24015987)
Genome browser
AA seq
443 aa
AA seq
DB search
MAADKSPIDEALLHGKHEEALLHGKHEHVEQQLLPTSGGSFCITGASFGRSCLNLSNVIS
GIGMLSVPYALSQGGWLSLALFAMVGAICFYTGKLIYRCMRADRCVRSYPDIGYLAFGRY
GRTAIGLIMYVELYLVAISFLILEGDNLDKLLPGTVVKILGYQVHGKQLFMLVAAAVILP
TTWLKNLSMLAYVSAVGLVSSVALTVSLVWAGVADKGFHMAGSSILNLSGLPTALSLYFV
CFAGHGVFPTVYSSMRARKDFPKVLLISSVLCSLNYAVTAVLGYKIYGEDVQAQVTLNLP
TGKLYTRIAILTTLITPLAKYALVIQPVTTAIEEKLSTAAAAVAADAENNRLTRVLTSTT
VVFSTVVLACTVPFFGYLMSFIGSSLNVTVAVLFPCLSYLKIYMPRGGVGRFEVAAIVGI
LVIGVCVAVIGTYTSLHQIIGTF
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggataagagccctatcgacgaggctctcctacatggcaaacacgaagaggct
ctcctacatggcaaacacgagcacgtggagcagcagctcctccccaccagcggcggctca
ttctgcatcaccggcgcttccttcgggaggagttgcctcaacctgagcaacgtgatatct
ggcatcgggatgctctccgtgccgtacgcgttgtcgcagggcgggtggctcagcttggcg
ctcttcgccatggtcggcgccatctgcttctatactggcaaactcatctatcgctgcatg
cgcgccgaccgttgtgtacggagctacccggacatcggctacctcgcctttggccgttac
ggccggacagctatcggcctcatcatgtatgtcgagctctacctcgtcgccatcagcttc
ctcatcctcgagggcgacaacctcgacaaactcctccccggcacggtggtgaagatcctg
gggtaccaagtgcatgggaagcagctgttcatgctcgtggcggctgccgtcatcctcccg
acgacgtggctcaagaacctgagcatgcttgcctacgtctcggcggttgggctcgtctcg
tcggtggcgctgacggtgtcgctggtctgggccggcgtggccgacaagggcttccatatg
gcgggcagtagtatcttgaatctcagcgggttgcccaccgccctcagcctctacttcgtc
tgcttcgctggccatggcgtctttccgaccgtgtactcctcaatgagggccaggaaggat
tttcctaaggttttgctgatctcttcggtgttgtgcagtctcaactacgcagtgacagca
gtgttgggatataagatctacggtgaggatgtgcaggcgcaggtgacactaaacttaccc
acgggaaagctgtacaccaggattgccatcctaacgaccctgatcaccccactggcgaag
tacgcgctcgtgatccagcccgtcacgaccgcgatagaggagaagctgtcgacagcggcg
gcggcggtagcggctgatgccgaaaacaataggctaaccagggtgctcaccagcacaacc
gtcgtcttcagcacggtggtgctggcatgcacggtgcccttcttcggctacctcatgtcg
ttcatcgggtcctcattgaacgtcactgtcgccgtcctgttcccgtgtctgagctacctc
aagatctacatgcctcgaggaggagttggccgcttcgaggtggcggcgatcgttgggata
ctggtcatcggagtgtgtgtcgccgtcattggcacctacacctcccttcaccagattata
ggcacattttga
DBGET
integrated database retrieval system
