KEGG   Oryza sativa japonica (Japanese rice): 4326007
Entry
4326007           CDS       T01015                                 
Name
(RefSeq) actin-interacting protein 1-2
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:osa04990]
    4326007
Domain-containing proteins not elsewhere classified [BR:osa04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   4326007
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WDR90_beta-prop_4th PD40 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_SPT8 eIF2A Beta-prop_Vps41 Beta-prop_WDR75_2nd Ge1_WD40 Beta-prop_IFT122_2nd Beta-prop_BBS7 WD40_like DUF5711 RAB3GAP2_N
Other DBs
NCBI-GeneID: 4326007
NCBI-ProteinID: XP_015621882
UniProt: Q9AWU6 Q7F5T9
LinkDB
Position
1:join(1421357..1421748,1422284..1422445,1422973..1423159,1423660..1424085,1424800..1425207,1425836..1426093)
AA seq 610 aa
MAQLQETYACSPATERGRGILLAGDPKTETIAYCTGRSVIIRRLDAPLDCWAYPDHAYPT
TVARFSPNGEWVASADASGCVRVWGRYGDRALKAEFRPLSGRVDDLRWSPDGLRIVVSGD
GKGKSFVRAFVWDSGSTVGEFDGHSKRVLSCDFKPTRPFRIVTCGEDFLANYYEGPPFKF
KHSIRDHSNFVNCIRYAPDGSKFISVSSDKKGLIYDGKTGDKIGELSSEGSHTGSIYAVS
WSPDSKQVLTVSADKTAKVWDILEDASGKLNRTLACPGTGGVDDMLVGCLWQNDYLVTVS
LGGTFNVFSASNPDKEPVTFAGHLKTVSSLAFFPQSNPKTILSTSYDGVIMRWIKGVGYG
GRLMRKNNTQIKCFTVAEEELVTSGYDNKVFRIPLNGDQCGDAESVDVGGQPNALNLAIQ
KPEFALVTTDSGIVLLHKSTVISTTKVNYTITSSAVSPDGTEAIVGAQDGKLRIYSINGD
TVTEEALIEKHRGAITCIHYSPDVSMFASADANREAVVWDRATREIKLKNMLFHSARINC
LAWSPDNRLVATGSLDTCAIVYEIDKPASSRITVKGAHLGGVHGLTFVDNDSLVTAGEDA
CIRVWKLVPQ
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggcgcagctgcaggagacgtacgcgtgctcgccggcgacggagcgcggccgcgggatc
ctcctcgcgggggaccccaagacggagacgatcgcctactgcacgggccgcagcgtcatc
atccgccgcctcgacgcgccgctcgactgctgggcctacccggaccacgcctacccgacc
accgtcgcccgcttctcccccaacggcgagtgggtcgcctccgccgacgcctccggctgc
gtccgcgtctgggggcgctacggcgaccgcgccctcaaggccgagttccgccccctctcc
ggccgcgtcgacgacctccgctggtcccccgatggcctccgcatcgtcgtgtccggggac
ggcaaggggaagtccttcgtccgcgctttcgtgtgggactctggcagcactgttggtgag
tttgacgggcactcaaagagagttctgagctgtgactttaagccaacccggccgttccgc
attgtgacatgtggtgaagattttctggcaaactactatgaaggaccaccatttaaattc
aagcattccataagggatcactcaaactttgttaactgtatccgatatgctcctgatggg
agtaagtttatcagcgtgagttcagataagaagggtttgatatatgatggcaaaactgga
gacaagattggagaactttccagcgaaggcagtcacacagggagtatatatgctgttagc
tggagtcctgacagcaaacaagttctgacagtttctgctgataaaactgccaaagtctgg
gacatactagaagacgctagtgggaaattgaacagaactttggcttgtcctggtacaggt
ggagtagatgacatgcttgtgggttgcctctggcagaatgattatcttgtgacagtctct
cttggtgggacatttaatgtgttctctgcaagtaatccagacaaagagccagtaaccttt
gcaggacatttgaagactgttagttctttggcctttttcccacaaagtaaccccaaaact
atactgtccacaagttacgatggcgttatcatgagatggataaagggtgttggatatggt
ggcagattgatgcgaaagaacaacacccagattaaatgctttactgtagcagaagaggaa
ctcgtcacctctggatatgataacaaggttttcagaattcctcttaatggagatcagtgt
ggagatgctgaatcagttgatgtaggaggtcagccaaatgctttgaaccttgcaattcaa
aaacctgaatttgcactggtcacaacagattctgggatagtattgctgcacaagtcaacg
gtcatttctacaaccaaagttaattatactatcacttcatctgctgtttctcctgatggc
actgaagccatcgttggtgcacaagatgggaaactgcgtatctattccatcaatggggat
acagttacagaagaagcattaattgagaagcaccggggtgctattacttgcatacattat
tcgcccgatgtttccatgtttgcttctgctgatgccaacagggaagccgttgtgtgggat
cgggcaacgagagagatcaagctgaagaacatgttgttccactcagctcggataaactgc
ctggcttggtcacctgacaatcgcctggttgccacaggctcattggacacctgtgcaatt
gtatatgaaatagacaagccagcatccagccgcatcaccgtaaaaggagctcatcttggt
ggagtccatggtttaacctttgtcgataatgatagtctggtgactgctggggaggatgca
tgcatccgagtttggaagctggtgccacaatag

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