Oryza sativa japonica (Japanese rice): 4326008
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Entry
4326008 CDS
T01015
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23 isoform X1
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4326008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4326008
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
4326008
Ubiquitin system [BR:
osa04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
4326008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-B_UBE2O
UQ_con
SH3-C_UBE2O
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
4326008
NCBI-ProteinID:
XP_015620122
LinkDB
All DBs
Position
1:join(1430785..1432701,1432779..1432913,1433009..1433431,1433621..1433693,1433797..1433936,1434061..1434372,1434713..1434982)
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AA seq
1089 aa
AA seq
DB search
MENLPNGSANIAEKNQDNEMSTDAGEPEEVADIFIYREDVVSLKSKEDTRGLVLEVAGEY
DSEGSITDDDTDTEEHEHKSSHRTENGGADGDNVSNGVDVDSQSSLPDNKVRVLWIDGVE
KTEDIDSVVVMDRSFLHGDIVASATDPTGQMGLVADVSLVVDLQGPHGEIIKGVSSKDLR
RIREFNVGDYVVSGPWLGRVDEVLDNVNVLFDDGSVCKVARADPMRLRPALGPLNPNASC
PFYPGQRVKAVNSSVYKTSRWLNGLWKASRLEGTVTKVETVAVIVYWIASAHFATNQESV
PPEEQNPKDLTLLSCFSYANWQLTDWCLPNQYTSSCTDDSLIESSEIKDSDDIPESSDVK
TELTQKTDMDENPGRMDGDSSADGSNMVYEDNTCLAKQSESGTIASTVPKEGSQDNATYR
KKLRKVFVKKDKRTRRRDESFERALLIANTYTKVDVIWQDGTKECGASSTLLIPIHSPND
HEFFPEQYVVDKVGNDVDDSSETKRVGLVRSVNAKDRTASVSWFKPSLHPEEPREIECNE
IVSAYELDGHPDYDYCYGDVVVRLPSVSLPVESTNRENTMELDNVNSTEVSATPVADAEE
QFPQKESSLEFTSLSWAGNIVGFEDGDIIVIWGDGSVSKVGPHEIYVVGREDDGASLDDG
TASDGASWETVDDNQTDLPDDSAQDDSQNVADSNIERENGSFNSQDGSSVATGPLSVAFG
FVTRLASELFARGKKHLDGSNSDAMDEVESHQSNEISESGDDIDKAEGENNVATSESTVV
TTNDASGGKSVDVDMADKPGDSDGFKHFDVQQCPPDHHYLENMAQQGTGGRKWVKKVQQE
WNILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLFFFDFHLPPEFPQVPPSAYY
HSGGLRVNPNLYVDGKVCLSLLNTWTGRGNEVWDPSSSSILQVLVSLQGLVLNEKPYFNE
AGYEKQVGTVEGEKNALPYNENTYLLSLKSMLYILRRPPMHFEDFAKSHFSKRGKYILKA
CEAYLQGNGVGTLTDDACTTERSKEQPCSVGFKLALAKIMPRLITALKDAGANCDQYEHL
GKTETAQEH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctaccaaatggctcagcaaatatagctgagaagaaccaggataatgagatg
tctacagatgctggtgagcctgaagaagtagcagatatatttatttatagagaagatgtt
gtcagcttgaagtcaaaagaggacacccgtgggttggttttggaggtagcaggagaatat
gattctgaaggtagcatcactgatgatgatactgatactgaggagcatgaacacaaaagt
tctcataggactgaaaatggtggtgctgatggtgataatgtcagtaatggagttgatgtt
gatagtcagagttcattgcctgataacaaggttagggttctatggattgatggtgtcgag
aagacggaagatattgacagcgtggttgtcatggacagaagtttccttcatggagatata
gtggcttctgccacagatccaactggtcagatgggacttgttgctgatgtcagccttgtg
gttgatttgcaaggacctcacggagaaataataaagggagtatcctctaaagatttgaga
cgcatcagggaatttaacgtaggtgattatgttgtctctgggccatggcttggtcgagtc
gacgaggtgttggataatgttaatgtgttatttgatgacggctccgtctgtaaagtagcc
agggcagatcctatgcggctaaggccagcattggggccactgaatccaaatgcaagctgt
cccttttatcctggacagcgtgtcaaggcagtgaattcatctgtttacaaaacatccagg
tggctcaatggactatggaaagcaagtcgtcttgaaggcactgtcacaaaggtggaaaca
gttgcagttatagtctattggattgcatctgcacactttgccacgaatcaagaatctgtt
cctcctgaagagcagaacccaaaggatctgactcttttatcttgtttttcatatgcaaat
tggcaattaactgattggtgtcttcctaaccaatacacatcatcgtgtactgatgattct
ttgattgaaagttcagaaataaaagactctgatgacattcctgaatccagtgatgttaag
acagaactaacgcagaagactgatatggatgaaaaccctgggaggatggatggagattct
tctgctgatggatcaaatatggtttatgaagataacacatgcttagccaaacaatcagaa
tcaggcactattgcatcaaccgttccaaaggagggatcacaggacaatgcaacttacagg
aaaaaacttaggaaagtttttgtcaaaaaggataaaagaacaagaagaagagacgagagc
tttgaaagggctctgcttattgcaaatacatacacgaaggttgatgtgatctggcaagat
gggacaaaagaatgtggagcaagctcaacattgctcatcccgatccacagtccaaatgac
catgaattctttccggagcagtatgtcgtggacaaggttggtaatgatgttgatgattct
tctgaaacaaaacgtgtgggtcttgttagaagtgttaatgcaaaggaccgaactgcatct
gtatcatggtttaagccttcattacacccagaggagcccagagaaatcgagtgcaatgaa
attgtgagtgcatatgaattggatggccatccagattatgattattgctatggagatgtt
gttgttcgcttgccatctgtttcactgcctgttgaatcaaccaatagggagaacaccatg
gaactggataatgtaaattctacagaagtatcggcaacccctgtagctgatgcagaggaa
cagtttccacagaaggaatccagtttggaatttactagcctttcatgggctggtaatata
gttggttttgaagacggtgatattatagtcatttggggcgatggttcagtgtcaaaggtt
ggtccacatgaaatatatgttgttggtcgtgaagatgatggtgcctcactagatgatgga
actgccagtgatggtgctagctgggagactgttgatgacaatcaaacggatttgcctgat
gattctgcacaggatgattcgcaaaatgtagcagatagtaacatcgaaagggaaaacggt
tcatttaattcgcaggatggaagctctgttgcaactggtccactttctgttgcttttggc
tttgtgactcggctcgcgagtgaactctttgctcgaggtaaaaagcatttagatggatca
aactcagatgctatggatgaagttgaatctcaccagtctaatgagatttcagaatctggt
gatgatattgataaagctgagggggagaacaatgtggcaacatctgagagtaccgttgta
acaacaaatgacgcttccggtgggaagtctgtagatgttgatatggctgacaagcctgga
gattcagatggcttcaaacactttgatgttcagcagtgccctccagaccatcattacctg
gaaaacatggcgcagcagggcactggtggaagaaagtgggtaaaaaaggtacagcaggaa
tggaacatacttgagaaaaatctaccagattatatttatgttagggtatttgaggatcga
atggacctcataagagccgtgattattggagcaagtggaacaccataccaagatggtctt
ttcttcttcgacttccaccttccacctgagtttccacaagttcctccgtcggcgtactat
cattctggaggtttgcgcgtaaatccaaacctgtatgtggatgggaaggtctgcttaagt
ctcttgaatacctggacgggcagagggaatgaagtatgggatccatcatcatccagtatt
ctccaagtcctggtttcacttcagggcttggttctaaatgaaaagccttattttaatgaa
gctggctatgagaagcaagttggtactgttgaaggggagaagaatgcattgccatataat
gagaacacatatctgctgagcttgaaatccatgttgtatatcctgaggcgacctccaatg
catttcgaggactttgcaaagagccacttctccaagcgtggcaaatacattctcaaagct
tgtgaggcctatttgcaaggtaatggggttgggacgctcacagatgatgcctgcaccacc
gagagaagcaaagaacagccatgctcggtgggtttcaaactcgcattagcaaaaattatg
ccacggttgattactgccctgaaggacgctggagcaaattgtgaccaatatgagcacctt
gggaaaacggaaactgctcaagaacactga
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