KEGG   Oryza sativa japonica (Japanese rice): 4326033
Entry
4326033           CDS       T01015                                 
Name
(RefSeq) LOW QUALITY PROTEIN: leucine--tRNA ligase, chloroplastic/mitochondrial
  KO
K01869  leucyl-tRNA synthetase [EC:6.1.1.4]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    4326033
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:osa01007]
    4326033
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4326033
   03029 Mitochondrial biogenesis [BR:osa03029]
    4326033
Enzymes [BR:osa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.4  leucine---tRNA ligase
     4326033
Amino acid related enzymes [BR:osa01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   4326033
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    4326033
 Prokaryotic type
    4326033
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    4326033
SSDB
Motif
Pfam: tRNA-synt_1_2 tRNA-synt_1 tRNA-synt_1g Anticodon_1 tRNA-synt_1f
Other DBs
NCBI-GeneID: 4326033
NCBI-ProteinID: XP_015621237
LinkDB
Position
1:complement(join(1153317..1153551,1153711..1153842,1154716..1154793,1155253..1155430,1155500..1155672,1155762..1155863,1155948..1156025,1156409..1156490,1156574..1156636,1158427..1158506,1158760..1158954,1159043..1159304,1159797..1159951,1160030..1160096,1160187..1160410,1160553..1160657,1160865..1160984,1161459..1161515,1161614..1161758,1161989..1162317))
AA seq 952 aa
MAVAMMQTPLQLRLQPRPPAVVAARHRRRLQSGFPPPNPRRGGGWCRCCANADAGKAQAQ
ARRAYPYDEIEPRWQRHWEEHRTFRTPDIGHGLDTSKPKCYILDMFPYPSGAGLHVGHPL
GYTATDILSRFKRMQGFNVLHPMGWDAFGLPAEQYAIETGTHPKITTERNINRFRSQLKS
LGFSYDWDREISTTEPTYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVIDG
VSERGGHPVIRKPMRQWMLRITSYADRLLEDLDELDWPESIKEMQRNWIGRSEGAELEFS
AVDKEGHDLGANLLVYTTRPDTIFGATYVVLAPEHSLLSSLISEEQRVHVEEYIELTARK
SELERTDLQKEKTGVFSGSYAKNPATGEIVPIWVADYVLGSYGTGAIMAVPAHDSRDHEF
ALKYKLPIIKVVSPLNGNCDSEEAYADDGIMINSSSSSSGLNIDGMLSKDAALKVTEWVE
ANGFGKKKVNYKLRDWLFARQRYWGEPFPVIYRDDTNEMLPLQENQLPLTLPELDDFTPT
GTGEPPLTKATDWVKTVEPLSGKPARRETSTMPQWAGSCWYYLRFMDPQNASMLVDKAKE
SYWGPVDIYVGGAEHSVLHLLYARFWHKVLYDIGVVSTKEPFKCLINQGLILGEVEYTAY
RDNKGRWVSADSNSSLIDCYQEKVPADKVTKVGDHYVLKDDANIRLNARAYKMSKSRGNV
INPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIEGVHRFLGRTWRLVVGTPLPDGSY
GVGTTVTDEEPTLDQLRVLHKCIARVTEEIQETRFNTAISAMMEFVNAAYKWDTQPKSVI
ESFILLLSPFAPHMAEELWFRLGNSRSLAHEQFPEGKSEYLKESKLVLPVQINGKTRGTI
LVDKECSEDDAFQIAASDEKLSKYLTGKGIRKRIYVPGRILNVILDKQKART
NT seq 2860 nt   +upstreamnt  +downstreamnt
atggcggtagcgatgatgcagacgccgctccagctccggctgcagccgcggcccccggcc
gttgttgctgcccgccaccgccgccgcctgcaaagcgggttcccgccgccgaatccgcgg
cgaggtggtgggtggtgccgctgctgcgcgaacgccgacgccgggaaggcgcaggcgcag
gcgaggagggcgtacccgtacgacgagatcgagccgaggtggcagaggcactgggaggag
caccgcacgttccgcaccccggacatcggccacggcctcgacacctccaagcccaagtgc
tacatcctcgacatgttcccctaccccagtggagctgggctgcatgttgggcatcccctt
gggtacacggcaactgacatcctgtcgaggttcaagcgcatgcaaggcttcaatgtgttg
catccgatgggatgggatgcatttggtcttcctgcggagcagtatgctatcgagacggga
acccaccctaagattaccactgaacggaacatcaatcgattccgctcacagctcaaatcg
ttaggtttttcatatgactgggatcgtgaaatttccacaacggaaccgacttactacaaa
tggacacaatggattttccttcaactactgaaaagaggactggcctatcaggctgaggta
ccggttaattggtgccctgctcttggaactgttctggcgaatgaagaagtaatagatggt
gtcagtgaacgtggtggtcatcctgttatacgaaagccaatgcgccagtggatgctgagg
attacatcttatgctgatcgacttcttgaagatttggatgaacttgattggcctgagagc
atcaaagaaatgcaaagaaactggatagggagatcagaaggcgctgagcttgaattctca
gctgtggacaaggaagggcacgatctaggtgctaatttgttagtttacacaacaagacct
gacacaatttttggtgcaacatatgttgttctggcacccgagcattctctattgtcatct
ctaatttctgaggaacaacgtgtacatgtagaggaatacatagaactcacagcaagaaag
agtgaactggaaagaactgatcttcagaaggaaaaaactggagtttttagtggttcttat
gctaagaacccagcaactggggagatagttccaatatgggtggcagattatgttttagga
agctatggcactggggctatcatggctgtgcctgcacatgactcacgtgaccatgaattt
gccttgaaatataaacttccaatcattaaggttgtaagtccactcaatggcaattgtgac
tctgaggaggcatatgcagatgatggtatcatgataaactcatccagttcttcatctgga
ttaaatattgatggtatgctttccaaggatgctgctttgaaagttactgaatgggtagag
gctaatggctttggaaagaaaaaggtgaactacaagcttcgagattggctctttgctaga
cagcgttattggggtgaacctttccctgtgatttaccgtgatgataccaatgaaatgctg
ccccttcaagaaaaccagttgcctttaactcttcctgaattggatgatttcactccaact
ggtactggagagcctcctctgaccaaggcaacagattgggttaaaaccgtagaacctttg
tctgggaagcctgctagaagggaaacaagcaccatgccacaatgggctggatcatgctgg
tattatttgagatttatggatcctcaaaatgccagtatgttggttgacaaggcaaaagag
agttattggggcccagttgacatctatgttggtggtgctgaacattctgtcttgcatttg
ctttatgcaagattttggcataaggttctttatgatattggcgtagtttccactaaagag
cccttcaagtgcctgataaatcaaggattgattctaggagaagttgaatatactgcatat
agagacaataaagggagatgggtttctgcagattccaactcaagtttgattgattgctac
caagaaaaagtacctgcagataaggtcacaaaagttggagatcattatgtactgaaggat
gatgcaaacatacgtctaaacgctcgtgcttataaaatgagtaaaagtcgaggaaatgtc
atcaacccagatgacgtggtttcagaatatggtgctgattctctccgcttatatgaaatg
ttcatgggaccactgagagattcaaaaacatggagcactggtggaattgaaggtgtgcat
agatttctaggaaggacatggagactcgtagttggtacaccattaccagatggatcatat
ggagttggaactacggttactgatgaggaaccaaccttggatcagctccgagttcttcac
aaatgcattgcaagagtcacagaggaaattcaagaaacaagatttaacactgcaatttct
gcaatgatggaatttgtgaatgctgcatacaagtgggacacccaaccaaagtcagttatt
gaatcctttattctgttgctttcgccttttgcaccacacatggctgaggagctttggttt
cgccttgggaactcaagatcattggcccacgagcaatttccagagggaaaaagtgagtac
ttgaaagaatcaaagctcgtgcttccagtgcaaatcaatgggaagaccaggggtacaatt
cttgtcgacaaagagtgctctgaggatgatgcattccaaatagcagcctccgacgagaaa
ctctccaaatatttgactgggaagggcatcaggaagagaatttatgtgcctggaaggatt
cttaatgttatacctagataaacagaaggcaaggacctga

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