KEGG   Oryza sativa japonica (Japanese rice): 4326176
Entry
4326176           CDS       T01015                                 
Name
(RefSeq) nuclear pore complex protein NUP85
  KO
K14304  nuclear pore complex protein Nup85
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    4326176
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4326176
   03036 Chromosome and associated proteins [BR:osa03036]
    4326176
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     4326176
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    4326176
SSDB
Motif
Pfam: Nucleopor_Nup85
Other DBs
NCBI-GeneID: 4326176
NCBI-ProteinID: XP_015621953
UniProt: Q0JJD6 A0A0P0V845
LinkDB
Position
1:join(31803250..31803677,31805614..31805716,31805827..31805937,31806039..31806122,31806340..31806411,31806498..31806554,31806852..31806971,31807726..31807926,31808378..31808488,31808590..31808627,31808712..31808868,31809125..31809226,31809303..31809359,31809538..31809684,31809854..31809924,31810007..31810094,31810235..31810291,31810421..31810618)
AA seq 733 aa
MPGMLMDGGGAIVPFSGEPGHAVAAAPPVRNIRHGVAPPISRVYVSFSSGNLLQVACLRP
PNPEGGGDRGAEEVSGGRVVEVNLGGGGSGPGGADAEEIDEAEMRRIEYGSVPAFALLQS
RKNALVDGSGMSRLPSVSEHAEWWQYVLEYSKTIGSLLGNPDSLSAYMIDDPKMILKVKE
KPTSLKAAWELLEIFFVDKQLQTWLPERLVDWLADYDSLLTKTENTIYRTLINFQKKLIN
LQVVEDDPDYWSGLSAALSVGWLDIVVNMLRFHGSYQLDQMDSRETENGLVEAVAVLVST
MPRMRPDLPSGKLGQCCKTRPDFIKALEKWRGQVSKLECSAFWIQCGHQKTRDGLKSLLH
IMLGNIKNLTASTSHWLELFASHLLYIRPFTVGFEGMHQLAQKCIQLKPSADNSGLTGLL
TGILSENREVVLAECTKNFGPWMVTHAMELLTADNDYADMMLHEERPNFGGISIEELHRL
VYAQVLCSHALTWQIAPTYLSSCLNQGLGLLEILLLKQPIQDNRVVLKTLEICRLYELEN
VSTNIMKIAGIYHWKHGRKGTGVYWFQQANDKVRLDRIAQQLFEHIGKSVTDDSFKQWEG
LLELLGSDIGSAGGLEFLHRYRDFKRSLQMAQEGRTGESVRQTVEFLIQLMRNPSTPQRF
WLPLLHDSVRLLNCKPCPLLNVAETTLLLNKLQELSLAKLRPDFSNIHLPSHALNSVRLA
LASNLARAILEEP
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgccagggatgctgatggacggcggcggcgccatcgtgccgttctcgggagaaccaggc
cacgcggtggcggcggccccgcccgtgcggaacatccgccacggcgtggccccgcccatc
tcccgcgtctacgtttccttttctagcggcaacctcctgcaggtcgcctgcctccgccca
ccgaatccggagggtggcggagaccgtggggcggaggaggtctccggggggagagtggtg
gaggtaaacctcggaggtggcggtagcgggcctggcggcgcggatgcggaggagatcgat
gaggcggaaatgcggaggatcgagtacgggtcggtaccggcgtttgcgctgcttcagagc
aggaagaacgcgctcgtagatggctccggtatgtcgcgcttgccctcagtctcggagcac
gcagaatggtggcaatatgtgcttgaatacagtaaaaccatcggtagtctccttgggaac
ccagattctctttctgcttacatgattgatgacccaaagatgatccttaaggtcaaggag
aagcctactagtttaaaggctgcgtgggagttgctagagatattctttgttgataaacag
ttgcaaacttggcttccagagcgtcttgttgattggttagccgactatgacagcctcttg
accaagacagagaacacgatatatcgcacgctgatcaatttccagaaaaagctcatcaac
ctgcaggttgttgaagatgatcctgattattggagtggattatcagcagctctatcggtt
ggatggcttgatattgtggtgaatatgctacgttttcatggatcataccaattggatcag
atggacagccgtgagacagaaaatgggttggttgaagctgttgctgttcttgtgtcaaca
atgccacgcatgcgaccagatttgccatcgggtaaattaggccagtgttgtaaaacaaga
ccagattttataaaggcattggaaaaatggcgaggtcaagtaagtaaactggagtgcagt
gcattctggattcagtgcggtcaccaaaaaactcgtgatggtctgaagagtttgcttcat
attatgttggggaacataaagaacctcactgcttctacttcacattggctggagctcttt
gcttctcatttactttatataaggccattcacagtgggttttgaagggatgcatcagtta
gcacaaaagtgcatacagcttaaaccgtctgctgacaatagcggattgacaggcctcctt
actggtatcctttcagaaaatagagaggttgtcttggctgaatgcacaaaaaattttggt
ccttggatggtcacacatgctatggagctgctgactgctgacaatgactatgcggatatg
atgttgcatgaagagaggcctaacttcggtggtataagcatagaggagctgcacaggctt
gtttatgctcaagttttgtgctctcatgctttaacatggcagattgcaccaacttatctg
tcctcatgtctaaaccaaggcctagggctgttggagattctgcttctgaagcaacccata
caagataatcgtgttgtattgaagactttggaaatttgccgcttgtatgagctggagaat
gttagtacaaatatcatgaagattgctggcatttatcattggaaacatggtaggaaagga
actggagtttactggttccagcaagctaatgataaagttcgtcttgacagaattgctcaa
caattattcgaacatattggcaagtcggtcacagatgatagttttaagcaatgggagggg
ctgcttgagttactaggttctgacatcggtagtgcaggtggtcttgagttccttcacagg
taccgagatttcaaaaggtcccttcagatggcacaagaaggaaggactggcgagtctgtt
cggcaaaccgtggagtttcttatacagctgatgagaaatccttctacacctcaacgtttc
tggctaccacttttacatgactcggtgaggcttctcaattgcaaaccctgcccattgtta
aatgttgctgaaacgactttgttgctcaacaagctacaagaactgtcattggccaaactt
cggcctgacttttccaacattcacctaccaagccatgcattgaactccgtcagattagct
ctagcatcaaaccttgcgcgtgcaattcttgaagaaccttaa

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