KEGG   Oryza sativa japonica (Japanese rice): 4326261
Entry
4326261           CDS       T01015                                 
Symbol
GYRB, P0667A10.1
Name
(RefSeq) dNA gyrase subunit B, chloroplastic/mitochondrial
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:osa03032]
    4326261 (GYRB)
   03400 DNA repair and recombination proteins [BR:osa03400]
    4326261 (GYRB)
Enzymes [BR:osa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     4326261 (GYRB)
DNA replication proteins [BR:osa03032]
 Prokaryotic type
  DNA Topoisomerases
   4326261 (GYRB)
DNA repair and recombination proteins [BR:osa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      4326261 (GYRB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim GyrB_hook TOPRIM_C HATPase_c_3 PhosphMutase
Other DBs
NCBI-GeneID: 4326261
NCBI-ProteinID: NP_001388569
LinkDB
Position
1:join(9238292..9238434,9238547..9238688,9239814..9239894,9239992..9240105,9240731..9240787,9241170..9241271,9241578..9241728,9241812..9241888,9242682..9242789,9243645..9243715,9244507..9244648,9244864..9244962,9245073..9245201,9245406..9245520,9245747..9245814,9247371..9247484,9247548..9247664,9248040..9248093,9248182..9248287,9249233..9249363,9249450..9249518)
AA seq 729 aa
MGPLLRSSPPPRHLRLLLRRLLSTAAGRPSRLLPLPASSSARLLVRPRVAVAAAAAGAPL
RRNGVAVRAFMASTAASEAMQEKRVAGEYTAANVQVLEALDGVRTRPGMYIGSTGSRGLH
HLVYEILDNAVDEAQAGYATKVDVILHGDNSVSVTDNGRGIPTDIHPQTKKSCVETVLTL
MHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQNYSRGKAITMLT
SRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNPELTIALTKEEDD
LQVQHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSLQWCSDSYSDTVLG
YANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHVREGMTCIIAVKVP
NPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAALAAKRA
RELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGSAKQGRDRKFQAILPLRG
KILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVILTDADVDGAHIRT
LLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKELVNTFPTNASYHIQ
RFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTRVDVRKQLIQNAAS
MVNLEHLDI
NT seq 2190 nt   +upstreamnt  +downstreamnt
atggggcccctcctccggtcgtcgccgccaccgcgccacctgcgcctcctcctccgccgc
ctcctctccaccgccgccggtcggccctcccgcctcctcccgctccccgcctcctcctcc
gcccgcctcctcgtcaggcccagggttgcggttgcggctgctgcggcgggtgctcctctg
cggcggaatggggtcgcggtgagggctttcatggcatccacggcggcttccgaggcgatg
caggagaagcgggtggccggggagtacaccgctgcgaacgtccaggtcttagaagcattg
gatggagttcgcacaaggcctggtatgtacattggaagcacaggatcacgagggttgcat
catctggtttatgaaatattggataatgccgtggatgaagctcaagcaggctacgccact
aaggttgatgttatccttcatggcgacaattcagttagtgtaacagacaatggtcgtggg
atccctacagatatacaccctcagacgaagaaatcttgcgtggaaaccgtcttaacgtta
atgcacgctggtggcaaatttggaggttcaaagagtggctacactgtttctggagggctg
catggtgttggcctatcagttgttaatgctttgtcagaggcactagaagttactgtttgg
cgtgatggaaaagaataccgacaaaattactcacgtggaaaagctatcacgatgctaact
agtaggacattgtctgatgaatcaagttctcgtcaaggcacacggatcagattttggcct
gataaacatatttttaccaccacaatggactttgacttcaatacgatagctggtcgcatc
cgggaacttgcctttctaaatcctgagctgacaatagcattgacaaaggaagaagatgac
ttacaggttcaacacaatgaatactgttatgctggtggtctggttgagtatgttaaatgg
ttgaatactgacaagaaatcccttcatgatccaatcgcattcagaaaagaaatggatgga
ataacagtggatgtttcccttcaatggtgctctgattcatactctgatacggtgctagga
tatgctaacagtatccgtactattgatggtggtactcatattgatgggctgaagacttca
ttgacaagaacaatcaataacttcgcaaagaagtcgaagactcttaaggataaagatatt
agcttgagtggggagcatgtaagagagggaatgacctgcattattgcagtgaaggtccct
aatccagagtttgaagggcaaacaaagacgaggttgggaaatccagaagtccgaagaata
gttgaacaatctgttcaagaaaatttaactgagtacttagagttacatccagatgtttta
gattcgattctgtcaaagtcccttaatgctctcaaggctgcattggcagctaagagagct
agagagttagtgaggacaaaaagtgtattgaaatcttcttcacttcctgggaaattagct
gactgtgcatctagtgatcctgaagaatctgaaatcttcatagttgaaggtgattcagct
gggggtagtgcaaaacaaggacgtgataggaaatttcaggctattttgcctctaagaggc
aaaattcttaacattgaaaggagagacgaggcagccttgtacaaaaacgaagagatccaa
aatctaattgtcgctcttggattaggagtaaagggcgaggattttaacaaggaagctctt
cgatatcataagatagtcatactcactgatgctgatgtagatggtgcacatatccggact
cttctccttactttcttctttagatatcagaaagcactattcgatgaaggttgcatttat
gttggtgtgcctcctctttacaaggttgaacgtgggaaacaagcgcactactgctatgat
gatgctgaccttaaggagctagttaacaccttcccaacaaatgcttcttatcatatccaa
aggtttaaaggtcttggtgagatgatgccggcacaattatgggagacaacaatggaccct
gagaggaggatgttgaagcagctaaaggttgaagatgctgctgaggccaacgttgtgttc
tcatctcttatgggtacccgggttgatgtcaggaagcaactgatccagaatgctgcaagc
atggtcaacctagaacaccttgatatttga

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