Oryza sativa japonica (Japanese rice): 4326296
Help
Entry
4326296 CDS
T01015
Name
(RefSeq) light-mediated development protein DET1 isoform X1
KO
K10571
de-etiolated-1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4326296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4326296
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
4326296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
4326296
NCBI-ProteinID:
XP_015622107
LinkDB
All DBs
Position
1:complement(join(253381..253517,253779..253878,254271..254369,255027..255191,255270..255350,255436..255492,255726..255794,256105..256200,259735..259963,260084..260508,260771..260851))
Genome browser
AA seq
512 aa
AA seq
DB search
MATFFRSANLASRVFDRQFLSPRPGATVNTVRQFYENLVPSYTICDIDCPDYSFRKFTDD
GNYLVAFSRNHQDLIVYRPIWPTFSCNEPCDSHDLPPKAKKFDSFFKQLYSISLASSNEY
ICKDFFLYMECHQFGLFATSTAQSNDSSATEGAIHGVPSIEKITFYLVRLDDGAILDEKA
FRNDFINLAHSIGAYLYEDLLCIVSLRYQTIHVLQIRDSGNLVEVRKIGAFCQEDDELFL
HSHGQAARGVSFLPGIKQRLLSFIFRKTWNEESDQTLRVQHLKKKFYFHFQDYVDLIIWK
VQFLDRHHLFIKFGSVDGGVSRSTEQNSAFFAVYNMETTDIVSLYQNSSEELYSLFEYFY
DHFHTNPQNSSHGNFISSHSNNVHALDQLRTIKNKANSTSQQFVKKMMASLPYTCQSQSP
SPYFDLSLFRYDEKLISAIDRHRHCTEHPIKFISVKQPNVVKFKIKPGSDSGASDSRAKR
ISSFLFHPFFPLALSIQQTYMQPTVVNLHFRR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccttcttccgcagcgccaacctcgcctccagggtcttcgaccgccagttcctc
tccccacgccccggcgctactgttaacactgttagacagttctatgagaacttggttccg
agttacactatatgtgacatagattgcccagattattcatttcgtaaattcactgatgat
ggcaactatcttgtggcttttagccggaaccaccaagatttaatcgtgtaccgtcccatc
tggccaacattttcatgcaatgagccatgcgactctcatgatcttccacccaaagcaaag
aaattcgacagcttctttaagcagctctactcaatttcacttgcatctagcaatgaatac
atctgcaaggactttttcctttacatggagtgccatcagtttggcttatttgccacatca
actgcacaaagcaacgattcaagtgccactgagggtgctattcatggggtaccatcaatt
gagaaaattactttctatcttgtcaggctagacgatggcgcaatactagatgagaaagct
ttccgcaatgattttatcaatctggctcatagtattggagcttacttgtatgaggacctg
ctatgcattgtctctcttcgatatcaaacaattcatgtcctacagatacgagattcaggc
aaccttgttgaagtacgcaaaattggtgcattttgccaggaagatgatgagctatttctc
cattcacatggtcaggctgcacgaggtgtttcttttcttcctggcatcaagcaacggttg
ttgtcatttatttttcgcaagacatggaatgaggaatctgatcagaccttgagagtccag
catctgaagaagaagttctattttcactttcaagactatgttgatcttatcatatggaag
gtgcagtttttggatcgtcatcacctatttatcaagtttggtagtgtggatggaggggtt
tctcgcagcactgaacagaattcagcattctttgctgtgtacaacatggagacgacagat
attgtttcactctatcagaattcttcggaggagctctattcattgtttgaatatttttat
gaccattttcacacaaatccacaaaattcatcgcatggaaattttatctcgtcacattcc
aataatgttcatgctctcgatcaacttcggacaattaaaaataaagcaaacagcacctca
cagcagtttgtgaaaaagatgatggcgtcactaccttacacttgtcaatcacaaagtcct
tcgccatactttgacctatcattgtttcggtatgatgagaagctgatttcagcgattgat
cggcacagacactgtacagagcatccaataaaatttatatcagtgaaacagccaaatgtt
gtcaaattcaagataaaaccaggttcagattctggtgcttctgacagcagggcaaaaaga
atatcttccttcttgtttcacccatttttccctctcgcactttctattcagcagacatat
atgcagccaactgttgtcaatttacatttcaggagatag
DBGET
integrated database retrieval system
