KEGG   Oryza sativa japonica (Japanese rice): 4326362
Entry
4326362           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:osa03009]
    4326362
   04121 Ubiquitin system [BR:osa04121]
    4326362
Ribosome biogenesis [BR:osa03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    4326362
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     4326362
SSDB
Motif
Pfam: WD40 Sof1 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 WD40_RFWD3 ANAPC4_WD40 eIF2A WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_IP5PC_F PROPPIN VID27
Other DBs
NCBI-GeneID: 4326362
NCBI-ProteinID: XP_015615923
UniProt: B9EUL3
LinkDB
Position
1:join(7690503..7690568,7691266..7691355,7691436..7691547,7692251..7692278,7692455..7692553,7692906..7692975,7693057..7693091,7693187..7693261,7693346..7693441,7693668..7693731,7694336..7694389,7694565..7694650,7695092..7695152,7695248..7695312,7695547..7695652,7696434..7696522,7696645..7696807)
AA seq 452 aa
MRVKVISRSTDEFTRERSQDLQKVFRNYDPALRSQEKAVEYTRALNAAKLEKIFARPFIG
AMDGHVDAVSCMAKNPNYLKAIFSGSMDGDIRLWDIAARKTVCQFPGHQGAVRGLATSTD
GDLLVSCGVDCTVRLWKVPMLKMVDTNDAIGDASQPSAVYTWKHAFWGVDHQWDGNLFAT
VGAQVDIWDQNRSEPINSFEWGKDTVLSVRFNPGEPDVLITSASDRSITLYDLRMSSPAR
KLIMKTRCNSICWNPREPMNFTAVNEDTNCYSFDARKLDEAKVVHKGHVSAVMDIDYSPT
GREFVTGSYDRTVRIFQYNGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWK
SKASEQLGVLLPRERRKQEYLDAVKERYKHLPEVKRIVRHRHLPKPIYKAANLRRTMIEA
ENRKEERRRAHSAPGSMPVQPFRKRRIIKEVE
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgagggtgaaggtgatatcgcgctccaccgacgagttcacgcgggagcgcagccaggac
ctgcagaaagtattccgcaattatgatccagcacttcgttctcaggagaaagcggttgaa
tacaccagggctcttaatgctgcgaagttagagaagatatttgctaggccatttattgga
gcaatggatggccatgttgatgctgtatcatgcatggcgaaaaaccccaattatttgaaa
gcaatattttctggctcaatggatggggatattcgtctgtgggacattgctgcaaggaag
acagtctgccagttccctggacatcagggtgctgtgaggggtttggcgacatctactgat
ggtgatcttctagtatcatgtggtgttgactgcactgttcgactatggaaagtccctatg
ctcaagatggtagacactaacgatgctattggagatgcttctcagccatcagcggtctac
acctggaagcatgcgttttggggtgttgaccaccagtgggatggcaatctttttgcaact
gtaggtgctcaggttgatatatgggatcaaaacaggtcagagccaataaatagctttgaa
tggggtaaagatacagttctgtccgtgagatttaatcctggagaacctgatgttctaatt
acatcagctagtgatcggagtataacactttatgatctacgcatgtcatcccctgctaga
aagctaatcatgaagacaaggtgcaactcaatatgctggaaccctagggagcctatgaac
ttcactgccgtaaatgaagatacaaattgctattcctttgatgctagaaagcttgatgaa
gccaaagttgttcacaagggccatgtttcagcagtgatggacattgattattcaccaaca
gggcgtgaatttgttacgggttcctacgatagaacagtgcggatcttccaatataatggt
gatcatagcagggagatataccatactaagaggatgcaaagggtgttttgtgtgaaatac
acctatgatggaacctatttggtttctggcagtgatgatacgaatcttcggctgtggaag
tccaaagcttcagaacagttgggagttcttcttccaagagaacgcagaaaacaagaatac
ctagatgctgtcaaggagcggtataagcaccttcccgaagtcaagcggattgtgaggcat
aggcacttacctaagccaatctacaaggcggccaacttaaggcgaacgatgattgaagca
gaaaaccgtaaagaagaaaggaggcgtgcgcacagtgcccccgggagcatgcctgtgcag
cccttcaggaagagaagaataatcaaagaagtagagtaa

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