Oryza sativa japonica (Japanese rice): 4326397
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Entry
4326397 CDS
T01015
Name
(RefSeq) protein FIZZY-RELATED 3
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4326397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4326397
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
4326397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_EML
WDR55
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
MIOS_WD40
Beta-prop_DCAF4
Aldo_ket_red
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
4326397
NCBI-ProteinID:
XP_015632353
UniProt:
Q5JME1
Q5JM92
LinkDB
All DBs
Position
1:join(43602234..43602716,43602825..43603052,43603516..43603695,43603830..43604087,43604169..43604270,43604692..43604754,43604841..43604909,43604986..43605039)
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AA seq
478 aa
AA seq
DB search
MATDASPKPAPPRLNVPPAMAGGLRLDPAVASPARLLLDVPKTPSPSKTTYSDRFIPCRS
SSRLHNFALLDRDRASPSSTTDDAPYSRLLRAEIFGPDSPSPAPSSPNTNLFRFKTDHPS
PKSPFAASAAATAGHYDCTAGSAESSTPRKPPRKVPKTPHKVLDAPSLQDDFYLNLVDWS
SQNTLAVGLGNCVYLWSASNCKVTKLCDLGPRDSVCAVHWTREGSYLAIGTSLGDVQIWD
SSRCKRIRNMGGHQTRTGVLAWSSRILSSGSRDKNILQHDIRVPSDYISKFSGHRSEVCG
LKWSHDDRELASGGNDNQLLVWNQRSQQPILRLTEHTAAVKAIAWSPHQQGLLASGGGTA
DRCIRFWNTVNGNMLNSVDTGSQVCNLAWCKNVNELVSTHGYSQNQIMVWKYPSMSKVAT
LTGHTLRVLYLAMSPDGQTIVTGAGDETLRFWNIFPSMKTQAPVRDIGLWSFSRSHIR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggacgcgtcccccaagccggcgccgccgcgcctcaacgtgccgccggcgatg
gcgggggggctccgcctcgatcccgccgtcgcctccccggcccgcctcctcctcgacgtc
cccaagacgccatccccttccaagaccacgtacagcgaccgcttcatcccctgccgctcc
tcctcccgcctccacaacttcgccctcctcgaccgcgaccgcgcctccccctcctccacc
accgacgacgccccctactcccgcctcctccgcgccgagatcttcggcccggactccccc
tccccggctccctcctcccccaacaccaacctcttccgcttcaagaccgaccacccctcg
cccaaatcgcccttcgccgcctccgccgccgccaccgccggccactacgactgcaccgcc
ggctccgctgaatcctccacgccgcgcaagccgcccaggaaggtccccaagaccccgcac
aaggtcctggacgcgccgtcgctgcaggacgacttctacctcaatcttgtcgactggtcg
tcgcagaacacgctcgccgtcggcctcgggaattgcgtctacctctggtcggcttccaat
tgcaaggtcaccaagctctgcgatttggggcccagggacagcgtctgcgctgtgcactgg
acccgagaaggctcctatcttgccatcggcaccagccttggcgatgtccagatttgggat
agctctcgctgtaaacggattaggaacatgggaggacaccaaacacggactggtgtatta
gcatggagctcccgaatcttgtcctccggtagcagggacaagaacatattgcagcatgac
atccgtgtcccaagtgactatatcagcaagttctcagggcacagatcagaggtctgtgga
ctgaaatggtcgcacgacgaccgtgagcttgcatccggtggaaatgataatcagctgcta
gtatggaaccaacgttcgcagcagccgatattgaggctgacagaacacacagctgcagtt
aaagcaatagcatggtcaccacatcagcaaggcctcctggcatcaggtggtggaaccgct
gataggtgtatcaggttctggaacacggttaatggaaacatgctgaattcagtggacaca
ggcagccaggtttgtaatcttgcctggtgtaaaaatgtaaatgagcttgtgagcactcat
gggtattcccaaaaccaaatcatggtgtggaagtacccatctatgtcaaaggttgctact
ctaactggacacacgctgcgagtgctttaccttgcaatgtcacctgatggacagacaata
gtaacaggagccggggatgaaaccctcagattttggaatatttttccttcaatgaagaca
caggctcctgttcgtgatattgggctctggtcattctcgagaagccacatacggtga
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