Oryza sativa japonica (Japanese rice): 4326722
Help
Entry
4326722 CDS
T01015
Name
(RefSeq) probable beta-D-xylosidase 2
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00520
Amino sugar and nucleotide sugar metabolism
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
4326722
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
4326722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
4326722
NCBI-ProteinID:
XP_015630013
UniProt:
Q94IY5
LinkDB
All DBs
Position
1:join(10897186..10899013,10899089..10899717)
Genome browser
AA seq
818 aa
AA seq
DB search
MAASSSPRRLGFLAALVFAVSVSASVSSVSGGSGPITTNGGNYTRVCDPARFAAAGLDMA
GFPYCDASLPYADRVRDLVGRMTLEEKVANLGDRAGGAPRVGLPRYLWWGEALHGVSDVG
PGGTWFGDAVPGATSFPLVINSAASFNETLWRAIGGVVSTEIRAMYNLGHAELTYWSPNI
NVVRDPRWGRASETPGEDPFVVGRYAVNFVRGMQDIDGATTAASAAAATDAFSRPIKVSS
CCKHYAAYDVDAWNGTDRLTFDARVQERDMVETFERPFEMCIRDGDASCVMCSYNRINGV
PACADARLLTETVRRDWQLHGYIVSDCDSVRVMVRDAKWLGYTGVEATAAAMKAGLDLDC
GMFWEGVHDFFTTYGVDAVRQGKLKESAVDNALTNLYLTLMRLGFFDGIPELESLGAADV
CTEEHKELAADAARQGMVLLKNDAALLPLSPEKVNSVALFGQLQHINATDVMLGDYRGKP
CRVVTPYDGVRKVVSSTSVHACDKGSCDTAAAAAKTVDATIVVAGLNMSVERESNDREDL
LLPWSQASWINAVAEASPSPIVLVIMSAGGVDVSFAQDNPKIGAVVWAGYPGEEGGTAIA
DVLFGKYNPGGRLPLTWYKNEYVSKIPMTSMALRPDAEHGYPGRTYKFYGGADVLYPFGH
GLSYTNFTYASATAAAPVTVKVGAWEYCKQLTYKAGVSSPPACPAVNVASHACQEEVSFA
VTVANTGGRDGTHVVPMYTAPPAEVDGAPRKQLVAFRRVRVAAGAAVEVAFALNVCKAFA
IVEETAYTVVPSGVSRVLVGDDALSLSFPVQIDLQAAA
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcgtcgtcccctcgccgccttgggttcttggccgctctcgtgttcgccgtc
tccgtctccgcctcggtctcctctgtgtccggcggaagcgggccgatcaccaccaatggc
gggaactacaccagggtgtgcgacccggcgaggttcgcggcggcggggctggacatggcc
gggttcccgtactgcgacgcgtcgctgccgtacgcggaccgggtgcgggacctcgtgggg
cggatgacgctggaggagaaggtggccaacctcggcgaccgcgcgggcggcgcgccgcgc
gtggggctgcctcggtacctgtggtggggggaggcgctgcacggcgtgtccgacgtcggc
cccggcgggacgtggtttggcgacgccgtgcccggcgccaccagcttcccgctcgtcatc
aacagcgccgcgtcgttcaacgagacgctgtggcgcgccatcggcggcgtggtgtcgacg
gagatcagggccatgtacaacctgggccacgccgagctcacgtactggagccccaacatc
aatgtcgtccgcgacccgcggtggggccgcgccagcgagacccccggcgaggaccccttc
gtcgtcggccggtacgccgtcaacttcgtccgcggaatgcaggacatcgacggcgccacc
accgccgcatccgccgccgccgccaccgacgcgttctccaggcccatcaaggtgtccagc
tgctgcaagcactacgccgcgtacgacgtcgacgcgtggaacggcaccgaccggctgacg
ttcgacgcgcgcgtccaggagcgcgacatggtggagacgttcgagcggccgttcgagatg
tgcatccgggacggcgacgccagctgcgtgatgtgctcctacaaccgcatcaacggcgtc
ccggcctgcgccgacgcgcgcctcctcacggagaccgtccgccgcgactggcagctccac
ggctacatcgtctccgactgcgactccgtccgcgtcatggtcagggacgccaagtggctc
ggctacaccggcgtcgaggccaccgccgccgccatgaaggccggcctggacctcgactgc
ggcatgttctgggagggcgtccacgacttcttcaccacctacggcgtcgacgccgtccgg
caggggaagctcaaggagtccgccgtggacaacgcgctgaccaacctctacctcacactc
atgaggctcggcttcttcgacggcatcccggagctcgagtccctcggcgccgccgacgtc
tgcaccgaggagcacaaggagctcgccgccgacgccgccaggcaggggatggtgctcctc
aagaacgacgccgcgctgctcccgttgtcgccggagaaggtcaattcggtggcactgttc
gggcagctgcaacacatcaatgccaccgacgtcatgcttggagactacagaggtaagcct
tgcagggtggtgacgccgtacgacggcgtacggaaggtggtcagctcgacgtcggtgcac
gcatgcgacaagggatcgtgcgacacggcggccgcggcggcgaagacggtggacgcgacc
atcgtcgtcgccggcctgaacatgagcgtggagagggagagcaacgacagggaagacctc
ctcctgccgtggagccaggccagctggatcaacgccgtcgccgaggcctcgccgtcgccg
atcgtcctggtgatcatgtccgccggcggcgtcgacgtctccttcgcccaggacaacccc
aagatcggcgccgtcgtctgggccggctaccccggcgaggaaggcggcacggccatcgcc
gacgtgctcttcggaaaatacaatccaggaggaagattgccgctgacgtggtacaagaac
gagtacgtgagcaagatcccgatgacgtccatggcgctgcggccggacgccgagcacggc
taccccggccggacctacaagttctacggcggcgccgacgtgctctacccgttcggccac
ggcctcagctacaccaacttcacctacgcgtcggccaccgccgccgccccggtcacggtc
aaggtcggcgcgtgggagtactgcaagcagctcacctacaaggccggggtgtcctcgccg
ccggcgtgcccggccgtgaacgtggccagccacgcgtgccaggaggaggtcagcttcgcc
gtcacggtggccaacacgggcggcagggacggcacccacgtcgtgccgatgtacacggcg
ccgccggcggaggtggacggcgcgccgcggaagcagctggtggcgttccggcgggtgcgg
gtggccgcgggcgccgccgtcgaggtggccttcgcgctcaacgtgtgcaaggcgttcgcg
atcgtcgaggagacggcgtacaccgtcgtgccgtcgggagtcagcagggtcctcgtcgga
gacgacgcgctgtcgctgtccttccctgttcagatcgacctgcaggcggcagcatag
DBGET
integrated database retrieval system
