Oryza sativa japonica (Japanese rice): 4326983
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Entry
4326983 CDS
T01015
Name
(RefSeq) polygalacturonase At1g48100
Organism
osa
Oryza sativa japonica (Japanese rice)
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
4326983
NCBI-ProteinID:
XP_015622255
UniProt:
Q5ZDR5
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Position
1:join(12745347..12746570,12746662..12746829,12746976..12747020,12747122..12747964)
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AA seq
759 aa
AA seq
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MGPTASAAARRSTRQPSTMTTTMSRRTAAAVAVSVVLLLLSSCLPCCSEARLHYHRRQHR
RAPHRGHHRAAAAAAAATNGGSHISQPPAALPPDFDSGESPAETPGLPPAGVEDAPPRRS
PREKPCPTMQPPVKPPEELSPVGAPRSRVRAMPPSPSLSPPAKAPSHSHAKTPSMPPAER
PALPPTKAPAAISPATPPQLSPANAHSTHHHAKPPSLPPAEPPVPSPSPEHPPRHSPSKP
PAYAPAKPPTALRPAIPPAAMPKPPSVAPVQPPQRPPAPATKPPPSFPPQLAPTMPPPAH
APAETPAPPTTPPALPPATTAPSPKNSSSSPPPPCTGGGGGISNVFDVRAFGATGNGSSA
DGDTRAFRAAWKAACSAESATVLVPSDGVFTITSTIFAGPCKPGLTFQIDGVLMPPDGPA
SWPAADGRRQWIVFYRADGMTLSGKGTIEGNGEEWWNLPCKPHRGPNGSTLPGPCESPAL
IKFVASSDVSVQGLRMENSPQFHLKFDGCSRVLVDGLVVSSPASSPNTDGVHVENTSSVR
ILNSRISNGDDCVSIGGGCSGVRVENVTCVHGHGISIGGLGARGARACVSNVTVRGARVV
DSDNGVRIKTWQGGAGSVSGVVFDAVQMVNVRGCIVIDQYYCDAHGGAGAGCANQTAAVR
VDGVAYRGIRGTYNPRGGGGAPVRFACSDTVACTGITMTDVELLPAGGGDEGGGASAGAK
LADPYCWNAYGVMETLTQPPVHCLQEGRPESLQDQLASC
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggggccaacggcgagcgcggctgcacgccggagcacgcggcaaccgtcgacgatgacg
acgacaatgtcgcgtcgcacggcggcggcggtggccgtgtccgtggtgctcctcctcctc
tcgtcgtgtctcccttgttgctcggaggcaaggctgcactaccaccggaggcagcaccgg
agggcgccgcaccgcgggcaccaccgcgcggcggcggcggcggcggcggcgacgaacggc
ggcagccacatctctcagccgcccgccgcgctgcctcccgacttcgacagcggggaatcg
ccggcggagacgccgggcttgcctccggctggcgtcgaggacgctccgccgcggcgatct
ccgcgtgagaagccgtgcccgacgatgcagcctcccgtcaagccgccggaggagttgtcg
ccggtgggcgcgccgaggtcgcgcgttcgggccatgccaccgtcaccctcgctgtcgccg
ccggccaaggcgccgtcacattctcacgctaagacgccgtcgatgccgccggcggagcgg
ccggcgcttcctcccaccaaggcgccggcggcgatctcgccggccacgccacctcaactc
tccccagcgaacgcacattcgacgcaccatcacgcgaagccaccgtcattgcctccggcc
gagccaccagtgccctcgccgtcgccggagcatccaccgcggcactccccgtcaaagcca
ccggcgtacgctccggccaagccaccgacagcactacgtccggcgatccctccggccgca
atgccaaagccaccgtcagtcgctccggtgcagccaccgcagcggccgcctgccccggca
acaaagccaccgccgtcgtttccaccgcagctcgccccgacgatgccaccaccggcgcac
gcgccggcggagacaccagcaccaccaacaacgccaccggcgctgccaccggccacgacg
gcgccatcaccgaagaacagctcatcatcaccacctccaccctgcaccggcggcggcggc
ggcatcagcaacgtgttcgacgtgagggcgttcggcgcgacgggcaacggctcgagcgcc
gacggcgacacgcgcgcgttccgcgcggcgtggaaggcggcgtgctcggcggagtccgcc
accgtgctcgtgccgtccgacggcgtgttcaccatcacctccaccatcttcgccgggcca
tgcaagccaggcctcaccttccaaatcgacggcgtgctgatgccgccggacgggccggcg
agctggccggcggcggacggccggcggcagtggatcgtcttctacagggccgacgggatg
acgctgtccggcaagggcaccatcgaaggcaacggcgaggagtggtggaatctcccgtgt
aaacctcacaggggccccaatggatcgaccctacccggcccatgtgagagccctgcactg
atcaagttcgtggcgagcagcgacgtgagcgtgcagggcctgaggatggagaacagcccg
cagttccacctcaagttcgacgggtgcagccgggtgctggtcgacggcctcgtcgtcagc
tcgccggcgtcgagcccgaacaccgacggcgtccacgtcgagaacacgagctccgtccgg
atcctcaactccaggatcagcaacggcgacgactgcgtcagcatcggcggcggctgctcg
ggggtgcgcgtcgagaacgtcacgtgcgtgcacggccacggcatcagcatcggcggcctg
ggcgcgcgcggcgcgcgggcgtgcgtgtcgaacgtgaccgtgcgcggcgcgcgcgtcgtc
gactccgacaacggcgtgcggatcaagacgtggcagggcggcgccgggtcggtgtcgggg
gtggtgttcgacgccgtccagatggtgaacgtcaggggctgcatcgtcatcgaccagtac
tactgcgatgcgcacggcggcgccggcgccggctgcgccaaccagaccgccgccgtgcgc
gtcgacggcgtcgcgtacagggggatccgcggcacgtacaacccgcgcggcggcggcggc
gcgccggtgcgcttcgcgtgcagcgacaccgtcgcctgcacgggcatcaccatgaccgac
gtcgagctgctgccggccggcggcggcgacgaaggcggcggtgccagcgccggcgcgaag
ctggccgacccgtactgctggaacgcgtacggggtgatggagacgctgacgcagccgccg
gtgcactgcctgcaggaaggtcgcccagagtcgctgcaagatcagctcgcaagctgctga
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