Oryza sativa japonica (Japanese rice): 4327080
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Entry
4327080 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K03504
DNA polymerase delta subunit 3
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03030
DNA replication
osa03410
Base excision repair
osa03420
Nucleotide excision repair
osa03430
Mismatch repair
osa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4327080
03410 Base excision repair
4327080
03420 Nucleotide excision repair
4327080
03430 Mismatch repair
4327080
03440 Homologous recombination
4327080
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
osa01009
]
4327080
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4327080
03400 DNA repair and recombination proteins [BR:
osa03400
]
4327080
Protein phosphatases and associated proteins [BR:
osa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
4327080
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
4327080
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
4327080
MMR (mismatch excision repair)
DNA polymerase delta complex
4327080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
4327080
NCBI-ProteinID:
XP_015624950
UniProt:
Q5QNL2
A0A8J8XUI1
LinkDB
All DBs
Position
1:complement(join(5728990..5729128,5729872..5729953,5730559..5731041,5731181..5731593,5731829..5731988,5732110..5732234,5732325..5732380,5733521..5733601))
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AA seq
512 aa
AA seq
DB search
MAAAAADPALLDLIPQIHALFADPLRVISYKWLSRNFSVSSNDSKRLLQEFVNKHGADLK
VIYSVSGWLKKNPTNYCVKLTSGHKLEEARQEFKDSCSVQVYSIQACIPKDTAVLWNPEF
VQAEELFNRPFDEENCLRDNRFCGVLNSFVKRTANGKLVSSFPPKPINSVAAAAPLKTSS
APKEQSAKGQQQGLPGSSSPKKGTSNKAEKDISSVLDKATNAPVVKEPSIALQGNKNKAQ
NGKALPSNGGSLATMWGRASAKPKTPATTNPTVLPSVAVTADAQICAKEEANADSSDDEQ
AVHYKRGSSANNRKRRAVFDLSDDDEDDNVVAIASPEPPEQCITNPIDEVAQESNPKQEN
LENKQEVEKDVKCCIGRTESPECKTKSSNTVSHSGITLKEKNNGPPPNDNKQDHAAETAS
NSPKRRKVLKTRIDERGREVTEVVWEGEASAGDKAEKNVSDTGAANRATLSSKPQPVAKT
EKSNASSKTAGNKKPAKAGTKQGNIMSFFKKV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgccgcggacccggccctgctcgacctgattccccagatccacgccctc
ttcgccgatccgctccgtgtgatttcatacaaatggctcagcaggaacttctcagtatca
tccaatgattcaaagaggttgcttcaggagttcgtcaacaaacatggggctgatcttaaa
gtgatttacagtgtgtctggatggttaaagaagaaccccacaaattattgtgtaaaactc
acttcaggccataaacttgaagaagcaaggcaagaatttaaagattcttgttcagttcaa
gtgtacagtatccaggcttgtattccaaaagatactgctgtactttggaatcctgaattt
gtacaggcagaggagctttttaaccggccatttgatgaagaaaattgtttgagagataat
aggttttgtggtgttttgaattcttttgtcaagcgaactgctaatgggaagcttgtgagt
tcatttccgccaaagcctataaatagtgttgctgcagctgcaccgttgaaaactagtagt
gctccaaaagaacaatctgctaagggtcaacagcaaggtctacctggatcatccagtcca
aagaaaggaacaagtaataaggctgagaaggatatttcctcggtcttggataaagccacc
aatgctcctgttgtcaaagaaccatcaattgctctgcagggaaacaaaaacaaggctcag
aatgggaaggcgctgcccagtaatggtggatcacttgctacgatgtggggacgtgcatca
gctaaacccaagactccagctaccactaatcctacagttttaccaagtgttgctgttaca
gctgatgcacaaatatgtgcaaaggaagaagcaaatgctgatagtagtgatgatgaacaa
gctgtacactacaagcgtggctctagtgcaaataacagaaagagaagagcagtctttgat
ctttcagatgatgatgaagatgacaatgttgtagccattgcatctcctgagccaccggaa
cagtgcattacaaatcctattgatgaggttgctcaagaaagtaaccccaaacaagaaaac
ttggaaaataaacaagaggttgagaaggatgtgaaatgttgcataggaaggacagagtct
cctgagtgtaaaaccaaaagtagcaacactgtcagccattctgggatcaccttaaaagaa
aagaacaatggtccaccacctaatgacaataagcaggatcatgctgctgagactgcttcc
aactcacctaaaagaaggaaagttttgaagacacgaatagatgagcggggaagagaagta
accgaggttgtctgggagggtgaagcttctgcaggtgataaggctgagaagaatgtgagc
gatactggtgctgcaaacagggcaactctctcaagcaagccgcagccagtagcaaagacc
gaaaaaagcaatgcttcgagtaaaacagccggcaacaagaaacctgccaaggctggaacc
aagcaaggcaacattatgtcattcttcaagaaggtataa
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