Oryza sativa japonica (Japanese rice): 4327104
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Entry
4327104 CDS
T01015
Name
(RefSeq) large ribosomal subunit protein uL3m
KO
K02906
large subunit ribosomal protein L3
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4327104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4327104
Ribosome [BR:
osa03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
4327104
Bacteria
4327104
Archaea
4327104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L3
Motif
Other DBs
NCBI-GeneID:
4327104
NCBI-ProteinID:
XP_015617381
UniProt:
Q9LIT4
A0A8J8YFM9
LinkDB
All DBs
Position
1:join(8303204..8303569,8304420..8304629,8305683..8305787,8307235..8307348,8307441..8307605)
Genome browser
AA seq
319 aa
AA seq
DB search
MAAVSRGLLARLRHLSIAGPRLPPCCRPFSAEPLVSHPDDDDAAAGGGGGGGEGSGGGRI
IEARAGVMGPDSRRTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFA
LQLGAGQKKEKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALIPLGTTITVRHFVPGQFV
DVTGITKGKGFAGGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGG
VQRTVKNVWVYQIDPARNLLYLKGQVPGPQGSFVFVKDSIYKKPDIAKLPFPTYFSQEGE
SEELLVADLGDIDPFMVAD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtctcgaggggcctcctcgcgcgcctccgccacctctccatcgcgggccca
cgcctgcccccttgctgccgccccttctccgccgagcccctcgtctcccaccccgacgac
gacgacgccgccgccgggggcggcggcggcggcggcgagggatcgggagggggacggatc
atagaggctcgggcgggggtgatgggcccggactcgcggcggaccggcgtgatcggcgtc
aagtgcggcatgtcggcgatgtgggacaagtggggcgccaaggtgcccatcaccgtcctc
tgggtcgacgacaacgtcgtctgccaggtcaagaccgccgagaaggaggggttcttcgcg
cttcagcttggagcaggccaaaagaaggaaaaacatctaacaaaacctgaagtgggccac
ttcagagcacaaggagtccctctaaagagaaaactaagggagtttcctgttactgaagat
gcacttattcctcttggaacaacaatcacagttcgccattttgtgcccggacaatttgtg
gatgttactggaatcacaaagggcaaaggttttgcgggtggtatgaaaagacatggtttt
agtgggatgcctgcatcacatggtgcatctctatcacatcggagcatcggttctactggt
caaagagatgctcctggaagggtcttcaaaaacagaaagatgcctggacgtatgggtggt
gtacagcgcaccgtgaaaaatgtatgggtttatcaaatagaccctgccaggaacttattg
tatctgaaaggccaggttcctggtcctcaaggcagctttgtttttgttaaggactcaata
tacaagaaacccgacatagctaagctgcctttcccaacatatttctcacaagaaggtgag
tcggaggagctcctcgtcgctgatcttggtgacatcgacccattcatggtagcggattaa
Oryza sativa japonica (Japanese rice): 4328236
Help
Entry
4328236 CDS
T01015
Name
(RefSeq) large ribosomal subunit protein uL3c
KO
K02906
large subunit ribosomal protein L3
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4328236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4328236
Ribosome [BR:
osa03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
4328236
Bacteria
4328236
Archaea
4328236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L3
Motif
Other DBs
NCBI-GeneID:
4328236
NCBI-ProteinID:
XP_015625363
LinkDB
All DBs
Position
2:complement(join(1980733..1981022,1981756..1982287))
Genome browser
AA seq
273 aa
AA seq
DB search
MAMAAVGIGGGGGGALGLLAPRRRAASWSGAGGAAAAAARRRPLVAVVRASYEAGVGVMA
TKVGMMTYFDPATGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREEKLTRP
ELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLDFADMFKEGDLVDISGKSIGKGFQGGI
KRHNFKRGLMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDND
LKVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcggccgtgggcatcggcggcggcggcggcggcgcgctgggcctcctcgcg
ccgcgccgccgcgccgcctcctggagcggcgcaggtggcgcggctgcggcggcggcgcgg
cggcggccgctggtggcggtggtgcgcgcgtcgtacgaggccggggtcggggtgatggcg
accaaggtcgggatgatgacctacttcgacccggccaccggcaagccggtgccggtgacc
gtcgtggggttccgggagggcggcaacgtggtgacgcaggtgaagacggcggccaccgac
gggtacgacgccgtgcaggtggggtaccacggcgtccgcgaggagaagctcacccgcccg
gagctcggccacctcggcaaggccggcgcgccgccgctccgccacctgcaggagttccgc
ctccagtccgtcgacgggtacgaccccggccagccgctcgacttcgccgacatgttcaag
gagggcgacctcgtcgacatctccggcaagtccatcggcaaggggttccaaggtggcatc
aagaggcacaacttcaagcgagggctgatgacccacggctccaagagccacagagctctg
ggatcgatcggtgccgggacgacgccgggtcgggtgtacaaggggaagaagatgcccggg
aggatgggaggaaccaagaccaagatcaggaagctcaagatcgtcaagatcgacaacgac
ctgaaagttgtcatgatcaagggcgccgttccagggaagcccgggaacctcctccgcatc
gctcctgccaagatcgtcggcaagaacatccccaagaactag
DBGET
integrated database retrieval system
