Oryza sativa japonica (Japanese rice): 4327117
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Entry
4327117 CDS
T01015
Name
(RefSeq) importin subunit alpha-1a
KO
K15042
importin subunit alpha-6/7
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4327117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
osa03036
]
4327117
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
4327117
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
IBB
HEAT_EZ
Arm_3
HEAT_2
ARM_ARMC5
HEAT
ZER1-like_2nd
Arm_2
V-ATPase_H_C
Adaptin_N
CTNNBL
DUF4704
Motif
Other DBs
NCBI-GeneID:
4327117
NCBI-ProteinID:
NP_001393228
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All DBs
Position
1:join(8394144..8394353,8395216..8395312,8395409..8395500,8395592..8395723,8395838..8396023,8396107..8396270,8396377..8396455,8397347..8397475,8397965..8398092,8398211..8398574)
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AA seq
526 aa
AA seq
DB search
MSLRPSERVEVRRNRYKVAVDAEEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVP
ASAATGVDKKLESLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRF
VQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVW
ALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQT
RPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSV
LIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKD
QIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDL
LICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHDNNE
IYEKAVKILEAYWMDEEDDTMGATTVAAPQGATFDFGQGGGAAQFK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgcgcccgagcgagcgggtggaggtgcggcggaaccgctacaaggtggcggtg
gacgccgaggaggggaggcggcggcgcgaggacaacatggtggagatccgcaagagccgc
cgcgaggagagcctcctcaagaagcgccgcgaggggctccaggcccaggcccccgtcccc
gcctccgccgcaaccggcgtcgataagaagctcgaaagccttcctgctatgattggtgga
gtttattcggacgataacaaccttcagcttgaggccacaacacagttccgcaagttgctt
tctatagagaggagccctccaattgaagaggttattcaatcaggcgttgttcctagattc
gtgcagtttcttaccagagaggatttcccccagctacagttcgaagctgcgtgggcactt
acaaacattgcatctggcacttcggagaatacaaaggttgtcattgatcatggggctgta
ccaatatttgtgaagcttcttggttcttctagtgatgatgttcgtgagcaggctgtatgg
gcattgggcaatgttgctggtgattcccctaagtgccgtgaccttgttcttgccaatggt
gcattgctgcctctgctagcacagttgaatgagcacactaaactctctatgctaaggaat
gcaacttggactttatcgaacttctgcagaggaaaaccacagccatcatttgaacagact
aggcctgctcttccagcactggcacggcttattcactccaatgatgaggaagttctcact
gatgcgtgctgggctctttcatatttatctgatggcactaatgacaagatccaagccgtg
attgaagctggtgtttgcccccgtcttgtggagcttctcctccatccatcaccttcagtg
cttatacccgcactacgaactgttggaaatattgtaactggagatgacgcgcaaactcag
tgcatcattgatcatcaagccctcccttgcctcctaagtctgttgacacaaaatctcaag
aaaagcatcaagaaagaggcttgctggactatttcaaatattactgctggtaacaaagat
cagatacaggctgtcataaatgctggcattattggtcctctggtgaatctgctccaaacg
gcagagttcgatatcaagaaggaagctgcatgggccatctcaaatgctacttcaggcggt
agccatgatcaaatcaagtatctggtgagcgagggctgcatcaagccattgtgtgatctt
cttatttgcccagatataagaatcgttacagtttgtttggagggtctcgagaacattctt
aaagtaggagaaaccgacaagaccttggctgcaggtgatgtgaatgtcttttcccagatg
attgatgaagcggaaggtttggaaaagattgagaacttgcagagccatgataacaatgag
atctatgaaaaagctgtgaagattcttgaggcctactggatggatgaggaggatgataca
atgggagctaccacggtagctgctccccaaggtgctacttttgactttggccaaggcggt
ggtgctgctcaattcaaataa
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