Oryza sativa japonica (Japanese rice): 4327230
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Entry
4327230 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K15559
regulator of Ty1 transposition protein 103
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
4327230
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
4327230
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
CREPT
CTK3
EFR3
Motif
Other DBs
NCBI-GeneID:
4327230
NCBI-ProteinID:
XP_025878224
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All DBs
Position
1:complement(join(41185165..41185884,41186080..41186115,41186210..41186349,41187798..41187954,41188071..41188166,41196361..41196608,41197142..41197217))
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AA seq
490 aa
AA seq
DB search
MNAGFSPQILAQKLLKLNNSRQSIETLSHWCVFHYRHCRQVVETWESDFHSAPRERRVSL
LYLANDIVQNSKKDSGRYVNEFWRVIPAALNDVFVNGDDFGRNVVQRLVDIWEERNIFGS
HGQSLKEDYSRRFKEFKSKSRNSSGELLEKVISCYKHMLNAHVDDDTLMRKCQNALSFVD
NLSNEYENNSILDCSNGSGFVEELQEQHNILRDSIEQFKTSELLRGNLISCLKEALHEQE
FKMERARSQIKEVQSRYKKADDLCQKLGIHVERQEQPNHGPKNSGSEMHGSFGPDSANAS
SFEKGQSSAVMYSQENGGEHEIPNGVFSSRATKDNIEQKLEEHSTNKRQKLQNDVYVSRP
QSPPPPLPSDAFEQPPPPPEHPPPPESTSPPPPPTSDPPPVPPPPPTTGSFMPIPSAPFA
GLPVPAGPMTAVPYNSYPVFPPMNYPMVNIPPPFPSAPNTPPGFQGLAGPFYGPPYPAPP
PPPPPPMNRK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaggattcagcccacagatcttggcgcagaagcttttgaagctcaataattca
cgacaaagtatagagactttgtcacattggtgtgtctttcattatcgacactgccgacaa
gttgttgaaacatgggaatctgattttcactcagctcctcgtgagaggagggtatctttg
ctgtaccttgcaaatgatatcgtgcagaacagcaaaaaggactctggtagatatgtaaat
gagttctggagggttatccctgctgccttaaacgatgtgtttgtcaacggcgatgatttt
ggaaggaatgtcgtacagagactggttgacatatgggaagaacgtaacatatttggatcc
catgggcaaagtctcaaggaagactattctagaaggttcaaggagttcaaatccaagtcg
agaaattctagtggggagctgctggaaaaggttatctcttgctacaagcatatgttgaat
gctcatgtagacgacgatactctcatgcggaaatgtcaaaatgctcttagctttgttgac
aatctcagcaacgaatatgagaacaactctattttagactgtagtaatggatctggcttt
gtggaggagctgcaagaacaacataacatcctgagagactccattgaacaattcaaaaca
tcagaattactcagaggcaatcttatttcttgcttaaaggaagcactccatgaacaggag
ttcaaaatggaacgggccagaagccagattaaggaagttcaatcccgatacaagaaagct
gatgacctctgccagaagcttggaatacatgtagaaaggcaggaacaaccgaaccatggg
cctaagaactcaggttctgaaatgcatggtagctttggcccagattcagctaatgccagt
tcttttgagaagggacaatcaagtgcggtgatgtattcccaggagaacggcggtgagcat
gagatccccaatggcgttttctcttcacgggccaccaaggataacattgagcagaaacta
gaagagcactctacgaataagagacagaaactacagaatgatgtgtatgtttcacggcct
caatcgccacctccgccactgccatctgatgcatttgaacagccgccgccaccacctgag
catcccccgccaccagagtctacatcgccccctccaccgccaacttctgatccacctcca
gtccccccgccaccaccgacaacaggttcattcatgccaattccttctgctccgtttgcg
ggactgccagtacctgccggccctatgacagcagtaccctacaactcttacccagtattt
cctcctatgaactatcccatggtcaacatcccacctcccttccctagtgctccaaatacc
ccccctggtttccaaggtttggctggtcccttctatggccctccttaccccgcaccacca
ccgccaccgccaccaccgatgaacaggaaatag
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