Oryza sativa japonica (Japanese rice): 4327237
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Entry
4327237 CDS
T01015
Name
(RefSeq) ubiquitin-conjugating enzyme E2 27
KO
K04649
ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:
2.3.2.23
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4327237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4327237
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
4327237
Ubiquitin system [BR:
osa04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
4327237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
UBA
DUF1421
UBAP-1_UBA2
UBA_7
RWD
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
4327237
NCBI-ProteinID:
XP_015618841
UniProt:
Q8S1Y5
A3A140
LinkDB
All DBs
Position
1:complement(join(41239920..41240027,41240121..41240210,41241275..41241434,41241856..41241904,41242467..41242647))
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AA seq
195 aa
AA seq
DB search
MVDVSRVQKELTECNRDREVSGVSIALHDGSTISHLTGTIAGPQGTPYEGGTFVIDIRLP
GGYPFEPPKMQFITKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSAPAPD
DPQDAVVAQQYLRDYSTFSATARYWTEAFAKNSSTGMEEKVQKLVEMGFPEDMVRSVLKS
VNGDENMALEKLCSG
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgtgtcgagggtgcagaaggagctgacggagtgcaaccgggacagggaggtc
tccggggtgtccatcgcgctccacgacggctccaccatctcccacctcaccggcaccatc
gccgggccccaaggcacgccctacgagggcggcaccttcgtcatcgacatccgcctccca
ggtggttacccctttgagcctcctaagatgcagtttatcaccaaagtatggcaccctaac
attagcagccaaaacggagcaatctgcttggacatactgaaggaccaatggagcccagcc
cttacattgaagacggcactgctttccctccaagctctgctttctgcccctgcacctgat
gatcctcaggatgctgtcgttgcacaacagtacttgcgtgactattccacattttctgct
actgctcgctactggacggaggcctttgcaaagaattcctccaccggcatggaagaaaag
gtgcagaagctggttgagatgggcttccctgaagacatggtgagaagtgttctgaagagt
gtcaatggcgacgagaacatggctcttgagaagctctgctctggctga
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