Oryza sativa japonica (Japanese rice): 4327382
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Entry
4327382 CDS
T01015
Name
(RefSeq) uncharacterized protein isoform X2
KO
K02879
large subunit ribosomal protein L17
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4327382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4327382
Ribosome [BR:
osa03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
4327382
Bacteria
4327382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L17
DUF4224
Motif
Other DBs
NCBI-GeneID:
4327382
NCBI-ProteinID:
XP_015627914
UniProt:
Q5N9V4
A0A8J8XHB8
LinkDB
All DBs
Position
1:join(36632571..36632626,36632715..36632769,36632866..36632916,36633792..36633883,36634131..36634208,36634608..36634761)
Genome browser
AA seq
161 aa
AA seq
DB search
MGKFRKLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVRRKADQMVQLGKEGTLDAA
RRASAFVRGDDVVHKLFTELAYRYKNRAGGYTRLLRTRIRVGDAAPMAYIEFVDRENELR
EAKPATPQPPQRSPLDPWAKSRASQQWAGPKISEGSRKEGL
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggggaagttccgcaagctcggccgccacgccgcccaccgagtatccatgctcaggacg
atggtgtcgcagctcgtgaagcacgagcgaatcgagaccaccgtcgccaaggcgaaggag
gtgcggcgcaaggcggatcagatggtgcagctcgggaaagagggcacattggatgcagca
agacgtgcttctgcttttgttcggggagatgatgttgttcataagctatttacagagcta
gcctaccgttacaagaaccgagctggtgggtacaccagactattgcgaactaggatacga
gttggtgatgctgcaccgatggcatacattgagttcgttgatagggaaaatgaacttcga
gaagccaaacctgcaacaccacagccacctcaacggtctcctcttgatccctgggccaag
tctcgtgctagccaacagtgggcgggacctaaaatcagcgagggctctagaaaagaaggc
ttatga
Oryza sativa japonica (Japanese rice): 4334555
Help
Entry
4334555 CDS
T01015
Name
(RefSeq) large ribosomal subunit protein bL17c
KO
K02879
large subunit ribosomal protein L17
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4334555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4334555
Ribosome [BR:
osa03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
4334555
Bacteria
4334555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L17
Motif
Other DBs
NCBI-GeneID:
4334555
NCBI-ProteinID:
XP_015630559
UniProt:
B9F6Y0
Q75GR6
LinkDB
All DBs
Position
3:join(35147887..35148109,35148686..35149095)
Genome browser
AA seq
210 aa
AA seq
DB search
MAAFATATPSPAISVSPWSMSSLRAALPSPTRASPAGKLRSSFSPAAAATAASVGCLSSF
SGLTPISPLLSLGEETSSFEHRLFGIDARGRIVAMRHGRRVPKLSRPPDQRKALLRGLTT
QLLKYGRIKTTRPRAKAMRKYVEKMITLAKDGSLHKRRQALAFIYEKHIVHALFAEVADR
YGEREGGYTRIIPTFPRRGDNAPMAYIELV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttcgccaccgcgaccccctcgccggcgatctccgtgtccccctggagcatg
tcgtcgctccgcgccgcgctcccctcccccacccgcgcctccccggcggggaagctccgg
tcgtcgttctcgcccgcggcggcggccacggcggcgtcggtcggctgcctcagctccttc
tccggcctcacccccatttcgcctctcctctccctcggggaagagacttcaagctttgag
catcgattgtttggtattgatgcccgtggaaggatagtggcaatgagacatgggaggcgt
gttcctaaacttagcagacctccagatcagcgaaaggcacttctgcgcgggctgaccacg
cagctgctcaagtacggaaggataaagactaccaggccaagagcaaaggcaatgaggaag
tatgttgagaagatgatcacactggcaaaggatgggtctcttcacaagaggaggcaggct
ctggcttttatctatgagaagcatatagtccatgcgttgttcgctgaggttgcagacagg
tatggggaaagagaggggggctacacaaggatcatcccaacatttccaagacggggagac
aatgcacctatggcttacattgagcttgtctag
Oryza sativa japonica (Japanese rice): 4339018
Help
Entry
4339018 CDS
T01015
Name
(RefSeq) uncharacterized protein isoform X1
KO
K02879
large subunit ribosomal protein L17
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4339018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4339018
Ribosome [BR:
osa03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
4339018
Bacteria
4339018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L17
DUF4224
Motif
Other DBs
NCBI-GeneID:
4339018
NCBI-ProteinID:
XP_015638323
UniProt:
A0A8J8XS46
Q0DHK1
LinkDB
All DBs
Position
5:complement(join(22743961..22744166,22744413..22744465,22744650..22744727,22744856..22744947,22745550..22745600,22745731..22745785,22745925..22745980))
Genome browser
AA seq
196 aa
AA seq
DB search
MGKFRKLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVRTKADQMVQLGKEGTLDAA
RRASAFVRGDNVVHKLFTELAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEHSKKKSSVS
FTKSRIAEGLSTGRMNFERQNLQHHSHLSGSLLIHGPSHSPANNGQVLKSARTPEQKAYD
KPERSLALFYVVERFF
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggggaagttccgcaagctgggccgccacgccgcccaccgcgtctccatgctcaggact
atggtgtcgcagctggtgaagcatgagcggatcgagaccaccgtcgcgaaggcgaaggag
gtgcggacgaaagcggatcagatggtgcagctcggcaaagagggtacgcttgatgcagca
agacgtgcctcagcctttgttcggggtgacaatgttgttcacaagttattcacagaactc
gcctaccgctacaaagatcgagctggtggatatacaagactactgcggactaggatacgg
gttggcgatgctgcaccaatggcatacattgagcattcaaaaaaaaaatcatccgtttct
ttcactaaatcaagaattgcagaaggtttgtcgaccgggagaatgaacttcgagaggcaa
aacctgcaacaccacagccacctcagcgggtccctcttgatccatggaccaagtcactcg
ccagcaaacaatgggcaggtcctaaaatcagccagaactccggagcagaaggcttatgac
aaaccagagcgttctctagctttattttatgttgttgagaggttcttttga
DBGET
integrated database retrieval system