Oryza sativa japonica (Japanese rice): 4327440
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Entry
4327440 CDS
T01015
Name
(RefSeq) KH domain-containing protein SPIN1-like
KO
K14945
protein quaking
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4327440
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
4327440
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GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
4327440
NCBI-ProteinID:
XP_015625212
UniProt:
A0A9K3Y804
Q5QMM5
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All DBs
Position
1:join(35459620..35459717,35459896..35459984,35460321..35460472,35461259..35461369,35461488..35461604,35461799..35461942,35462349..35462489)
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AA seq
283 aa
AA seq
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MEALTNAEKCFSPARAMSPLPLVRPPPSPGAAGQYLAELLQEQQKIGPFVQVLPICGRLL
NQEIMRMSAIVSHLGVREHDRLPIASPNQMHPLPQVPNFCGNGFNPWTGTLPEKNGFPRG
TMGWEGAAHDPSYIVKKIVRLEVPTDAYPHFNFIGRLLGPRGNSLKRVEASTGCRVFIRG
KGSIKDPIKEEQLKGRPGYEHLSDPTHILIEAELPADVIDTRLAQAQEILEDLLKPVEES
QDFLKRQQLRELAVLNSTYREDSPHQNGSASPFSNGSTKLGKQ
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgttgacgaacgcggagaaatgcttctcccctgccagggcgatgtccccgctg
ccgctggtgaggccgccgccatcaccgggcgctgccggtcagtacctggcagagttgctg
caggaacagcagaagattggtccctttgtgcaggtgctcccaatctgcggcaggctgttg
aatcaagagataatgagaatgtctgctattgtttcgcaccttggagtaagggaacatgat
aggctgcccattgcaagtccaaaccagatgcatccgttgccgcaggtgcctaatttttgc
gggaatggattcaatccatggactgggacgctcccagagaaaaatggctttcctcgggga
actatgggttgggaaggtgcagcacatgacccatcttacattgtgaagaagatcgtgcgg
ctggaagttccaacagatgcttatcctcatttcaattttattggccgtctgcttgggcca
aggggaaactcactgaagagagttgaagcctcaacaggttgccgggttttcatcagaggg
aagggctccataaaagatcccatcaaggaggaacaattgaagggaaggcctggctatgaa
catttgagtgatccgacacatatcttgattgaagctgaattacctgctgatgtcattgac
acaagactagcacaagctcaagaaatactagaggacttgttgaaaccagtggaggagtca
caagactttctcaagaggcaacagcttagagagcttgctgtgctgaactccacatatcga
gaggatagcccccatcaaaatggcagtgcctctcccttcagcaatggtagcacaaaactc
gggaagcaatga
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