Oryza sativa japonica (Japanese rice) (RefSeq): 4327592
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Entry
4327592 CDS
T01015
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4327592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4327592
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4327592
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
4327592
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
4327592
Exosomal proteins of colorectal cancer cells
4327592
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Flagellin_N
Vps36_ESCRT-II
DUF5111
kleA_kleC
Motif
Other DBs
NCBI-GeneID:
4327592
NCBI-ProteinID:
XP_015618361
UniProt:
Q5N773
Q0JIB4
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All DBs
Position
1:complement(34583920..34587180)
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AA seq
447 aa
AA seq
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MSAAAADWLPAADVTAAGRPVLTAGEVERHLVAQGDVEPEESPRLGPLRARLLVLTSHRL
IFLHEPSRSARALPLAAVVHAYPPHRKHGHNPLRSIFSSSSSSSSSHHPRVRLQISLPPS
RSEVVAVVVSKGEADVFYGRLLEAVRARAWEVVAAVAAAPAGGSSAAQGAPAEEDLAIRM
PVVGVSGILRMEQEAWESAGQNLQDAFQDLNALMSKAKEMMELAEKMRQKLLTNSSAQSN
SNDEEMGSKQDMQDWLLSVGIVSPVTKETAGALYHQQLSRQLADYIRTPLEKAGGMMALV
DVYCLYNRARGTELISPEDLLQACSLWEKFDVPVMLRKFDSGVKVIQTKTHSDDEVFARI
SSLAQKEDALQKGISPSDAAFTLGIAPALAKEHLLNAESIGILCRDVSPDGLRFYINLFN
EIDPQNMYMPKTHGVYHTWISVTAASQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcggcggccgactggctcccggccgcggacgtgacggcggcggggcggccg
gtgctgaccgcgggggaggtcgagcgccacctcgtcgcgcagggggacgtggagcccgag
gagagcccccgcctcggccccctccgcgcccgcctcctcgtcctcacctcccaccgcctc
atcttcctccacgagccctcccgctccgcgcgcgccctcccgctcgccgccgtcgtccac
gcctacccgccccaccgcaagcacggccacaaccccctccgctccatcttctcctcctcc
tcctcgtcctcctcgtcgcaccacccgcgcgtccgcctccagatctccctgcccccgtcg
cgatcggaggtcgtcgccgtcgtcgtcagcaagggggaggccgacgtgttctacgggagg
ctgctcgaggccgtccgcgcgagggcgtgggaggtggtcgccgccgtggcggctgccccc
gcgggcggctcctcggcggcgcagggggcccccgcggaggaggatctcgccatcaggatg
cccgtggttggggtgtccgggatcctgcggatggagcaggaggcgtgggagagcgcgggg
cagaatctgcaggatgccttccaggatctcaacgccctcatgagcaaagctaaggaaatg
atggagttagcggagaaaatgaggcaaaagctattgacgaactcatcagcccaatccaat
tccaatgatgaagagatgggatctaagcaagacatgcaggattggctattgagtgttgga
atcgtgtcccctgtgacgaaagaaaccgctggtgctctgtaccaccagcagctgtcacgc
cagttggctgactatattagaacaccactagagaaagcaggtggtatgatggcactagtt
gatgtctattgtctctacaaccgtgcaagagggacagagttgatctcaccagaggatctt
ctgcaagcctgttccctttgggagaaatttgacgtcccagtcatgctcaggaaatttgac
agtggagtgaaggtgatccagaccaagacgcatagtgatgatgaggtatttgcgagaatc
tcatcacttgcacaaaaggaggatgcccttcagaagggaataagccccagcgatgctgca
tttacacttgggattgcacctgctttagcgaaggagcatcttctaaatgcagaaagcatt
ggtatcctttgcagggatgtcagtccagatgggttgcgcttctacatcaatctatttaat
gaaattgatccccaaaatatgtatatgccaaaaactcatggagtataccacacatggata
tctgtcacggcagcatcacagtga
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