Oryza sativa japonica (Japanese rice): 4327678
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Entry
4327678 CDS
T01015
Name
(RefSeq) vesicle transport V-SNARE 13
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4327678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4327678
Membrane trafficking [BR:
osa04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
4327678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Prominin
Peptidase_C101
Exonuc_VII_L
ETRAMP
Pox_EPC_I2-L1
DUF5798
IFT57
DUF4407
Cauli_AT
Motif
Other DBs
NCBI-GeneID:
4327678
NCBI-ProteinID:
XP_015621845
UniProt:
A0A8J8YJX4
Q8S0N4
LinkDB
All DBs
Position
1:join(29953006..29953099,29953210..29953268,29953504..29953692,29954883..29955053,29955713..29955865)
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AA seq
221 aa
AA seq
DB search
MSEVFEGYERQYCEVSASLFRKCTTASALDGEKKKQKLSEIQSGVEEAESLIRKMDLEAR
SLQPSVKAGLLAKLREYKSDLNNLKSELKRISAPNARQATREELLESGLADTLAASTDQR
GRLMMTTERLNQSNDKIKESRRTILETEELGVSILQDLHQQRQSLLHAHTTLHGVDDNVG
KSKKILAAMSKRMDRNKWIIGGIIAALVLAILLILYFKLAY
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtgttcgagggctacgagcggcagtactgcgaggtgtccgcctccctcttc
cgcaagtgcaccaccgcctccgccctcgatggagagaaaaagaagcagaagctgtccgag
attcagtccggcgtggaggaggctgagtcgctgattcggaagatggacctggaggcgagg
agcctacaaccgagcgtgaaggccggtttgcttgcgaagctgagggagtacaaatctgac
ctcaacaatctcaagagtgagcttaagaggatctcggcgcccaatgcaaggcaggctaca
cgggaggagctccttgagtcaggcttggctgacactctcgcggcgtctactgatcagagg
ggaagattgatgatgacaacagaaagactgaatcagtccaatgataagattaaagagagc
cgaagaaccatattggagacagaagaacttggtgtgtcaattcttcaggatcttcatcaa
caacggcagtcactgctgcacgctcatactactttgcatggggttgatgataatgttggc
aagagtaaaaagatcctggcggcaatgtcaaagaggatggacaggaacaagtggatcatt
ggggggataattgcagctcttgttctagccatccttctcatactgtactttaagctcgct
tattga
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integrated database retrieval system
