Oryza sativa japonica (Japanese rice) (RefSeq): 4327899
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Entry
4327899 CDS
T01015
Name
(RefSeq) exonuclease 1 isoform X1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
4327899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4327899
03400 DNA repair and recombination proteins [BR:
osa03400
]
4327899
Enzymes [BR:
osa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.-
3.1.-.-
4327899
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
4327899
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
4327899
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
MIT
5_3_exonuc
DUF3701
Motif
Other DBs
NCBI-GeneID:
4327899
NCBI-ProteinID:
XP_015612001
UniProt:
Q60GC1
LinkDB
All DBs
Position
1:32892634..32906089
Genome browser
AA seq
836 aa
AA seq
DB search
MGIQGLLPQLKSIMAPIGVEALKGQTVAVDTYSWLHKGALSCGDRLCKGLPTTRHIEYCM
HRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGNSRAAFECYQ
KAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGCS
RIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRAH
ALIQKLKGHEKVIKHLRYSAVSVPPQYEENFRKAIWAFQFQRVYDPVTEDIVHLSGIPHG
SSEDLDFLGPWLPQTVAKGIAQGNIDPITKEPFEGKTESSALAFDKVHLNRESSAPSNGK
KKLDLPVQRNVLTNYFCLASLEAKRKFRAPKVTPKQQVLNGSLPSPRIEDSGTPDLIEDT
SLPSNNIQVYQCSSEHFSSGTPLDDSINTASQCSSERVRCDIPRDDSASVSPQCSHDIGS
DPAEDPDIEGNKVKVNFCNRSTIPTGSFLEGTLPGISDPFLDSHNTEPSRAAPRYAEKSN
VVSANRNITVRSSYFKTVNKRVCTNQGEDECHDEDNCETGNYTLPGDQQRSSGGILKRRK
FSDPQNFEDGMFQPTSPHESPPVADKGCDSDSHDGINTNSEGKFGCNVAHVNKYSGIAEK
SMDKFAALISSFRYAGSRASGLRAPLKDVKNTLPVRSVLRPPEQRFGCTAKKTTRVPLQS
RFSSDATNSTDVPDLSTFAYRPTTASAHSDQGKITSKATDAAAGPPDLRTFAYAPTRSTT
SRFDQSENTRKAMCTADSPPDISTFEYKPMKSAVRRSDGSKFSGAALKAARRTSRS
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggggatccagggattgctgccgcagctgaagtcgatcatggcgcccatcggggtggag
gcgctcaagggccagacggtggccgtcgacacctactcctggctccacaagggcgccctc
tcctgcggcgaccgcctctgcaagggcctacccaccaccaggcatattgagtattgcatg
catagggttaacatgttgcggcaccatggcgtgaaaccaatccttgtatttgacggaggt
catctgccgatgaagggtgatcaagagactaaacgtgaaaggtcacgaaaggaaaatctt
gagcgtgccaaggagcatgaatctgctgggaattcacgtgctgcttttgagtgttatcag
aaagctgttgacattacacctaggattgcttttgaactgatccaggtattgaagcaagaa
aaggttgattatattgttgcgccttatgaagcagatgcacaaatgacattcttgtctgtg
aacaaacttgttgatgccgttatcacagaggattctgatctgataccatttggctgttct
agaattattttcaagatggacaagtttggacaaggtgttgaatttcatattacacgattg
cagcgatgcagggagcttgatcttaatggattcactatgcaaatgctactagagatgtgt
attttaagtggctgtgattatcttccatcattgcctggaatgggtgtgaaacgagctcat
gcacttatccaaaagctcaagggtcatgaaaaggtaatcaagcacctgaggtacagtgct
gtttctgttccacctcaatatgaagaaaacttcagaaaggcgatctgggcatttcagttc
caaagagtttatgaccctgtgacggaagatattgttcatttgtcaggcattccccatggc
agtagtgaagacttggactttttgggcccatggctaccacagactgttgctaaaggcatt
gcccaagggaatatcgatccgattaccaaggaaccatttgagggcaaaacagagagtagc
gcactcgcttttgataaagtgcatctgaacagagagtccagtgctccttcaaatggaaag
aaaaagcttgatctacctgtccaaagaaacgtattgacaaattacttctgcttagcatcg
cttgaggcaaaacggaagttcagagcacctaaggttacacctaagcaacaagtacttaat
gggtctttgcccagtcccagaattgaagactctggtacccctgatttaattgaagatact
agcttgccatcaaataacattcaagtttatcagtgtagttctgagcattttagctcagga
acccctctagatgattcaatcaataccgcctctcaatgtagttctgagcgtgtccgctgt
gacatccctcgggatgattcagccagtgtttcaccccagtgttctcatgatattggtagt
gatcctgctgaggacccagacattgaaggcaacaaggtgaaagtcaacttctgcaacaga
agtacaataccgacaggctctttcttagaggggactttgcctgggatatcagatccattt
ttagattcacacaacacagagccatccagagctgcaccacgttatgctgaaaaaagcaat
gtggtctctgccaatagaaatattactgtgaggagttcatatttcaaaacagtaaataaa
agagtttgcacaaatcaaggagaagatgagtgccatgatgaagataactgcgagactggt
aattacactcttcctggagatcaacaaagaagctctggaggtatattgaagagaagaaaa
tttagtgatccccaaaattttgaagatggaatgtttcaacccactagtcctcatgaaagt
ccaccggttgctgataaaggctgtgactctgattcccacgacggtatcaacacaaattct
gaaggaaaatttggatgcaatgtcgcccatgtaaataaatacagtggcattgcagagaaa
tcaatggataagtttgctgcgctgatatcatctttcagatacgcaggctctcgtgccagt
ggtcttcgcgctcctttaaaggatgtgaagaacactcttcctgtcagatctgttctcaga
cctccagaacagagattcggttgtacggctaagaagactactagagtgcctctacaaagc
agattctcaagtgatgctacaaacagcactgacgttcctgatctgagcacatttgcatac
aggcctacaactgcttctgctcattctgatcaggggaagatcacaagcaaagctacagat
gctgctgctggacctcctgacctgagaacatttgcttatgcaccaacaagatctaccacc
agccgttttgatcagagtgaaaacacgcgcaaagctatgtgcactgcggacagccctcct
gatattagcacattcgaatataaacccatgaaaagcgccgtcagacgttcagatgggagc
aagttttcaggtgcagcactaaaagcagctagacgaacctctcggagctga
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