KEGG   Oryza sativa japonica (Japanese rice): 4327899
Entry
4327899           CDS       T01015                                 
Symbol
EXO-1, EXO1, OsEXO-1
Name
(RefSeq) exonuclease 1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    4327899 (EXO-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:osa03032]
    4327899 (EXO-1)
   03400 DNA repair and recombination proteins [BR:osa03400]
    4327899 (EXO-1)
DNA replication proteins [BR:osa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    4327899 (EXO-1)
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     4327899 (EXO-1)
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 MIT 5_3_exonuc
Other DBs
NCBI-GeneID: 4327899
NCBI-ProteinID: NP_001396181
LinkDB
Position
1:join(33499277..33499437,33500173..33500292,33500562..33500685,33500808..33500945,33501076..33501285,33501669..33501844,33502102..33502174,33502621..33502747,33503039..33503385,33503493..33503547,33503671..33503966,33504064..33504115,33504324..33504531,33504648..33505071)
AA seq 836 aa
MGIQGLLPQLKSIMAPIGVEALKGQTVAVDTYSWLHKGALSCGDRLCKGLPTTRHIEYCM
HRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGNSRAAFECYQ
KAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGCS
RIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRAH
ALIQKLKGHEKVIKHLRYSAVSVPPQYEENFRKAIWAFQFQRVYDPVTEDIVHLSGIPHG
SSEDLDFLGPWLPQTVAKGIAQGNIDPITKEPFEGKTESSALAFDKVHLNRESSAPSNGK
KKLDLPVQRNVLTNYFCLASLEAKRKFRAPKVTPKQQVLNGSLPSPRIEDSGTPDLIEDT
SLPSNNIQVYQCSSEHFSSGTPLDDSINTASQCSSERVRCDIPRDDSASVSPQCSHDIGS
DPAEDPDIEGNKVKVNFCNRSTIPTGSFLEGTLPGISDPFLDSHNTEPSRAAPRYAEKSN
VVSANRNITVRSSYFKTVNKRVCTNQGEDECHDEDNCETGNYTLPGDQQRSSGGILKRRK
FSDPQNFEDGMFQPTSPHESPPVADKGCDSDSHDGINTNSEGKFGCNVAHVNKYSGIAEK
SMDKFAALISSFRYAGSRASGLRAPLKDVKNTLPVRSVLRPPEQRFGCTAKKTTRVPLQS
RFSSDATNSTDVPDLSTFAYRPTTASAHSDQGKITSKATDAAAGPPDLRTFAYAPTRSTT
SRFDQSENTRKAMCTADSPPDISTFEYKPMKSAVRRSDGSKFSGAALKAARRTSRS
NT seq 2511 nt   +upstreamnt  +downstreamnt
atggggatccagggattgctgccgcagctgaagtcgatcatggcgcccatcggggtggag
gcgctcaagggccagacggtggccgtcgacacctactcctggctccacaagggcgccctc
tcctgcggcgaccgcctctgcaagggcctacccaccaccaggcatattgagtattgcatg
catagggttaacatgttgcggcaccatggcgtgaaaccaatccttgtatttgacggaggt
catctgccgatgaagggtgatcaagagactaaacgtgaaaggtcacgaaaggaaaatctt
gagcgtgccaaggagcatgaatctgctgggaattcacgtgctgcttttgagtgttatcag
aaagctgttgacattacacctaggattgcttttgaactgatccaggtattgaagcaagaa
aaggttgattatattgttgcgccttatgaagcagatgcacaaatgacattcttgtctgtg
aacaaacttgttgatgccgttatcacagaggattctgatctgataccatttggctgttct
agaattattttcaagatggacaagtttggacaaggtgttgaatttcatattacacgattg
cagcgatgcagggagcttgatcttaatggattcactatgcaaatgctactagagatgtgt
attttaagtggctgtgattatcttccatcattgcctggaatgggtgtgaaacgagctcat
gcacttatccaaaagctcaagggtcatgaaaaggtaatcaagcacctgaggtacagtgct
gtttctgttccacctcaatatgaagaaaacttcagaaaggcgatctgggcatttcagttc
caaagagtttatgaccctgtgacggaagatattgttcatttgtcaggcattccccatggc
agtagtgaagacttggactttttgggcccatggctaccacagactgttgctaaaggcatt
gcccaagggaatatcgatccgattaccaaggaaccatttgagggcaaaacagagagtagc
gcactcgcttttgataaagtgcatctgaacagagagtccagtgctccttcaaatggaaag
aaaaagcttgatctacctgtccaaagaaacgtattgacaaattacttctgcttagcatcg
cttgaggcaaaacggaagttcagagcacctaaggttacacctaagcaacaagtacttaat
gggtctttgcccagtcccagaattgaagactctggtacccctgatttaattgaagatact
agcttgccatcaaataacattcaagtttatcagtgtagttctgagcattttagctcagga
acccctctagatgattcaatcaataccgcctctcaatgtagttctgagcgtgtccgctgt
gacatccctcgggatgattcagccagtgtttcaccccagtgttctcatgatattggtagt
gatcctgctgaggacccagacattgaaggcaacaaggtgaaagtcaacttctgcaacaga
agtacaataccgacaggctctttcttagaggggactttgcctgggatatcagatccattt
ttagattcacacaacacagagccatccagagctgcaccacgttatgctgaaaaaagcaat
gtggtctctgccaatagaaatattactgtgaggagttcatatttcaaaacagtaaataaa
agagtttgcacaaatcaaggagaagatgagtgccatgatgaagataactgcgagactggt
aattacactcttcctggagatcaacaaagaagctctggaggtatattgaagagaagaaaa
tttagtgatccccaaaattttgaagatggaatgtttcaacccactagtcctcatgaaagt
ccaccggttgctgataaaggctgtgactctgattcccacgacggtatcaacacaaattct
gaaggaaaatttggatgcaatgtcgcccatgtaaataaatacagtggcattgcagagaaa
tcaatggataagtttgctgcgctgatatcatctttcagatacgcaggctctcgtgccagt
ggtcttcgcgctcctttaaaggatgtgaagaacactcttcctgtcagatctgttctcaga
cctccagaacagagattcggttgtacggctaagaagactactagagtgcctctacaaagc
agattctcaagtgatgctacaaacagcactgacgttcctgatctgagcacatttgcatac
aggcctacaactgcttctgctcattctgatcaggggaagatcacaagcaaagctacagat
gctgctgctggacctcctgacctgagaacatttgcttatgcaccaacaagatctaccacc
agccgttttgatcagagtgaaaacacgcgcaaagctatgtgcactgcggacagccctcct
gatattagcacattcgaatataaacccatgaaaagcgccgtcagacgttcagatgggagc
aagttttcaggtgcagcactaaaagcagctagacgaacctctcggagctga

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