Oryza sativa japonica (Japanese rice): 4327989
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Entry
4327989 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K02988
small subunit ribosomal protein S5
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4327989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4327989
Ribosome [BR:
osa03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
4327989
Bacteria
4327989
Archaea
4327989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S5_C
Ribosomal_S5
MtrG
Motif
Other DBs
NCBI-GeneID:
4327989
NCBI-ProteinID:
XP_015626805
UniProt:
Q6YU81
Q6ZFK6
LinkDB
All DBs
Position
2:complement(join(133893..133958,134081..134140,134224..134325,134420..134515,134970..135077,135170..135220,135339..135865,135944..136439))
Genome browser
AA seq
501 aa
AA seq
DB search
MASSAAARSRAAASAAWARLLSLRPSPPVSSTHHLTLRIASPRRHFAFSANASSGSSRLK
QIQSERVIHDLFAELQRERQRDRQEEDEDEGEDEDYLGVKPLIEKLERRRAKEEAAPDDS
FWEPTDSDSDEEDERYTPDAIKRRVDEFERKCNRHSELLRSFAEAETLDDAHKWMTKIDR
FEERHLKLPLEYRVIGDMMNRLKDATGKDRFLLLQKLNRAVRIMECREAYDPSNPSNFGV
IQHQQVGSPEDLVLNAGFDREKQMIQGAGDDDDDEEFNEDKEKDDLLIEKLNSIEKKIEE
KLAELDHTFGKKGRVLEEEIKDLVEERNSLTEHKRRPMYRKGFDVKVIDVNRTCKVTKGG
QIAKFTALLATGNYHGVVGFAKARGPTAKIAIQRAYEKCFQDLHYMERYEDHTIAHAIQA
KYEKTKIYLWPGPMRSGMSAAGRTVETVLYLAGFSNVKSKIIGSRNPLNVIKALFIALNA
IETPKDVEQKFGRTVVESYLL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctccgccgccgcccggtcccgcgccgccgcctccgccgcgtgggcgcgcctc
ctctccctgcgccccagccctcccgtatcctccacccaccatctaaccctgcggatcgcc
tcccctcgccgccacttcgccttctccgccaacgcctcctccggcagctctaggctcaag
cagatccagagcgagcgggtcatccacgacctcttcgccgagctccagcgagagcgccag
cgggaccgccaggaggaggatgaggatgagggtgaggatgaggactacctgggcgtcaag
ccgctcatcgagaagctcgagcgccgcagggccaaggaggaggccgcgccggacgattcc
ttctgggagcccaccgactccgacagtgacgaggaggacgagcgctacacccctgacgcc
atcaagcgccgcgtcgacgagttcgagcgcaagtgcaaccgccactccgaactcctacgc
tccttcgccgaagccgaaacccttgacgatgcccacaaatggatgaccaagatcgacaga
ttcgaggagcgccatttgaagcttccactggagtacagagtcatcggcgacatgatgaac
cgcctcaaagatgccaccggcaaggaccgctttcttctcctccagaagcttaaccgagct
gttagaatcatggaatgcagggaagcatacgatcccagcaacccctccaatttcggggtc
atccaacaccagcaggtcggctctccggaggatcttgtgctcaatgctggctttgacagg
gagaagcagatgatccaaggggctggtgacgacgacgacgacgaggaattcaatgaagac
aaggagaaggatgatctgctcatagagaagttgaattctatcgaaaagaagatcgaggag
aaattagctgagttagatcatacgtttggtaagaagggcagagttctagaggaggaaatt
aaggatcttgttgaagagcgcaactccctcacggagcataagaggagacctatgtacagg
aaaggttttgacgtcaaggtcattgatgttaatcggacgtgtaaagtcacaaagggaggc
caaatagcaaaattcacagcattgttagcgactggaaactaccatggtgttgtaggattt
gcaaaagctagaggtccgacagccaagattgcaattcaaagggcttatgagaaatgcttc
caggacctccattacatggagcgatatgaggaccacacaattgctcatgcaattcaggcc
aaatatgagaagacaaagatatacctctggcctggaccaatgagaagtggaatgtctgct
gctggtaggacggttgaaacagtactgtatttagctggtttcagcaacgtcaagtcaaag
attattggttcaaggaaccccctgaatgttatcaaagctctcttcatagcattaaacgcc
attgaaacgccaaaggatgttgagcagaagtttgggcggaccgtggttgagtcatactta
ttgtag
Oryza sativa japonica (Japanese rice): 4333233
Help
Entry
4333233 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K02988
small subunit ribosomal protein S5
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4333233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4333233
Ribosome [BR:
osa03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
4333233
Bacteria
4333233
Archaea
4333233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S5
Ribosomal_S5_C
Motif
Other DBs
NCBI-GeneID:
4333233
NCBI-ProteinID:
XP_015633084
UniProt:
Q850W6
B9F990
LinkDB
All DBs
Position
3:complement(join(19863918..19864167,19866946..19867676))
Genome browser
AA seq
326 aa
AA seq
DB search
MAATSSTASAMAVAATSPTIATAPFSSLPLRLRLRPKPLLFTSRLLLPVPKSSSWVESVS
EEGEEEGVEEDSEESGAAGEDDDGEDNDEKPRPEPVAASGFEFASPPEGYVEPAPFDELP
PESPEDVAAAYEALYGPAFSGETVMGNNVFEVKVVDPVDMDREQRPSDEFSERVVQVNRV
TKVVKGGRQLSFRAIVVVGDMKGHVGVGVGKAKEVTEAITKAAMNGRRNLVTVPLTKYST
FPHRADADYGAARVMLRPACPGSGVIAGGAVRVVLEMAGVENALGKQLRSKNPLNNARAT
IKATQMMRQFKDVAAERGLPMEQLWK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggccgccacctcctccaccgcctccgccatggcggtggccgccacctcccctaccatt
gccactgcgccattctcgtctcttcctctccgccttcgcctccgccccaaacccctcctc
ttcacttctcgcctcctcctccccgtccccaagtcctcctcctgggttgaatccgtctcg
gaggaaggggaggaagaaggcgtggaggaggattccgaggaatccggtgccgcgggggaa
gacgatgacggggaggacaacgacgaaaagccgcggcctgagccggtggccgcctctggg
ttcgagttcgcgtcgccgccggagggctacgtggagccggccccgttcgacgagctgccc
ccggagtcgcccgaggacgtggcagcggcgtacgaagcgctctacgggccggcctttagc
ggcgagacggtcatgggcaacaacgtcttcgaggtcaaggtggtggatcccgtcgacatg
gaccgggagcagcgccctagcgacgagttcagcgagcgggtcgtgcaggtcaatcgcgtc
accaaggtcgtcaagggcgggaggcagttatccttccgtgcgatcgtcgtcgtcggcgac
atgaagggccacgtcggtgtgggcgttggcaaggccaaggaggtcaccgaggccatcacc
aaggccgccatgaacggccgtcgcaatctcgtcaccgtgccgctcaccaagtattcgacc
ttcccgcatagagcagatgcagactatggagcagccagggtcatgttgaggcctgcttgc
cctggatctggtgtaattgcaggtggagctgtgagggtcgtgctggagatggctggggtt
gaaaatgctctggggaaacagctgaggagcaagaaccccctcaacaatgcaagagctacc
atcaaggcgacccaaatgatgaggcagttcaaggatgttgctgcagagcgcgggcttcca
atggagcagctatggaaataa
DBGET
integrated database retrieval system
