Oryza sativa japonica (Japanese rice): 4328103
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Entry
4328103 CDS
T01015
Name
(RefSeq) syntaxin-52
KO
K08503
syntaxin of plants SYP5
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4328103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4328103
Membrane trafficking [BR:
osa04131
]
SNARE
SNAP-25[C] (Qc)
STX8
4328103
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
STX6_10_61_N
DUF2721
Motif
Other DBs
NCBI-GeneID:
4328103
NCBI-ProteinID:
XP_015626626
UniProt:
A3A2I2
Q6YUT2
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All DBs
Position
2:complement(join(1029267..1029398,1029507..1029551,1029630..1029730,1029982..1030085,1030232..1030333,1031070..1031284))
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AA seq
232 aa
AA seq
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MASSSDPWVREYSEASRLADDVTSMIADRGSLPQSGPEIMRHTSAIRRKITILGTRLDSL
EALLSRIPPKSITDKELHKRQDMLSNLKSRAKQMATSFNMSNFANREDLLGQSKKAADDM
SRVAGLDNQGIVSLQRQVMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLDDY
VDVTNSRLQRVQKRLAILNKRVKGGCSCMALLISVVAIVFLAVIAWLLIKHL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcttcggatccatgggtgagggagtacagcgaggcgtccaggctcgcggat
gacgtcacctccatgatcgccgataggggttcgctcccgcagtcggggccggagatcatg
cgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagcctc
gaggccttgctgtccaggattcctcccaagtccatcacggacaaggagttgcataagcga
caagacatgctttcaaatctgaaatctagagcaaagcagatggctacaagtttcaacatg
tcaaactttgcaaacagggaggatttgcttggtcagagtaagaaagcagctgatgatatg
agtagagtagctggtttggataaccaaggaatcgtttcacttcagaggcaagttatgaaa
gaacaagatgagggtcttgagaagctggaagagacagtactgagcacaaaacatattgct
ctagcagtcaatgaagaacttaccctgcatacaagattgattgatgatttggatgattat
gttgatgttacaaactcacgtcttcagcgcgtgcaaaagaggcttgctattctgaataag
cgcgtcaaaggtggctgctcgtgcatggccctgctgatatctgtcgttgctatagtgttt
cttgcggtcattgcttggcttctcatcaagcacctgtaa
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