KEGG   Oryza sativa japonica (Japanese rice): 4328118
Entry
4328118           CDS       T01015                                 
Name
(RefSeq) glutamate--tRNA ligase, chloroplastic/mitochondrial
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00860  Porphyrin metabolism
osa00970  Aminoacyl-tRNA biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01240  Biosynthesis of cofactors
Module
osa_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    4328118
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    4328118
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:osa01007]
    4328118
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4328118
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:osa02048]
    4328118
Enzymes [BR:osa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     4328118
Amino acid related enzymes [BR:osa01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   4328118
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    4328118
 Prokaryotic type
   Other AARSs
    4328118
Prokaryotic defense system [BR:osa02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    4328118
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-GeneID: 4328118
NCBI-ProteinID: XP_015622843
UniProt: Q6YUS0 B9F261
LinkDB
Position
2:complement(join(1097532..1097765,1098084..1098240,1098417..1098517,1098665..1098779,1099819..1099882,1099986..1100088,1100210..1100311,1100421..1100469,1100551..1100669,1100797..1100979,1101257..1101378,1102484..1102838))
AA seq 567 aa
MMAAAMGSPWLRIRLLPEVPPRLLRPHLRRTLSVRASASASASPDGAGGPVRVRFAPSPT
GNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKKSEEAVLSDLAWLGLDWDEGP
DVGGEFGPYRQSERNSMYKQYAEKLMESGAVYQCFCSSEELEQMKETAKQMQLPPVYMGK
WGTASDAEIQQELEKGTPYTYRFRVPKEGSLKINDLIRGEVSWNLDTLGDFVIMRSNGQP
VYNFCVTVDDATMRISHVIRAEEHLPNTLRQALIYKALGFPMPSFAHVSLILAPDRSKLS
KRHGATSVGQYKEMGYLPQAMVNYLALLGWGDGTENEFFTIDDLVEKFTINRVNKSGAVF
DAVKLKWMNGQHLRSFPPDVLIKSFEDRWKDTGILQESESGFAKEAAELLKDGIDLITDA
DAALSNLLSYPLHATLSSDEAKSVVQDKLSEVASGLISAYDSGELCQALAEGRDGWQKWV
KIFGKSLKRKGKSLFMPLRVLLTGKLHGPDMGGTVVLIHKAGTCGAVTQQSGFVNLDERF
RILKEVEWESLVQEQESPAETAVPASR
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgatggcggcggcaatggggtcgccatggctgcgcatcaggctgctcccggaggtgccg
ccgcgcctcctgcggccccacctccgccggaccctctccgtccgcgcctccgcctccgcc
tcggcgtcaccggacggcgccggcggcccggtgcgggtccgcttcgcgccgtcgccgacg
ggcaacctccacgtcggcggcgcccgcaccgcgctcttcaactacctcttcgcgcggtcc
aaggggggcaagttcgtgctccgcatcgaggacaccgacctcgagaggtccaccaagaag
tccgaggaggccgtgctcagtgacctcgcctggctcggccttgactgggacgaaggtccc
gatgttggtggggaatttgggccgtatcgccagtccgagcgcaattcgatgtacaaacag
tatgccgagaagctgatggagtctggtgcagtctatcagtgcttttgctccagtgaggaa
cttgaacagatgaaagaaactgcaaagcagatgcaacttccacctgtatacatgggcaag
tgggggactgcttcagatgcagaaatacaacaggagttagagaaggggacaccttacact
taccgtttccgtgtaccgaaggaagggtcgttgaaaattaatgaccttattcgtggtgag
gtcagttggaacttagacacgcttggtgatttcgtgattatgagaagcaatggccagcca
gtgtataacttctgtgtcacagttgatgatgctaccatgcgcatctctcatgttatcaga
gctgaagaacatctgccaaacacattacggcaggctcttatttataaagcacttggattt
ccaatgccttcgtttgctcatgtatcacttattctagctcctgatagaagtaaactgtct
aaacgtcatggggctacttctgtgggacagtacaaagagatgggctatttgcctcaggca
atggtaaattatttggcacttcttggttggggtgatggtactgaaaatgagttcttcacc
attgatgacctagtggaaaaattcactataaatcgtgtcaacaaaagtggagcagtcttt
gatgctgtaaaattaaaatggatgaatggacaacatctaagatcatttccccctgatgta
ctcatcaagagttttgaggatagatggaaggacacaggcattctccaggagtctgaaagt
ggttttgctaaagaagcggctgagcttttgaaggatggcatcgatttgatcactgatgct
gacgcagccctttcaaacctgttgtcgtatcccctccatgctacattaagcagtgatgaa
gctaaatctgtggtgcaagacaagctttctgaggttgcatcaggactcatttctgcttat
gatagcggtgaactttgtcaagcactagctgagggccgtgatggttggcagaagtgggtg
aaaatttttggcaaatcacttaaaagaaagggaaagtcactctttatgccgctccgtgta
ctgctgactggcaagcttcatgggcctgacatgggcggcaccgtagtcctcatacacaaa
gccggcacctgtggagcggtcactcagcaatccggtttcgtaaatctcgacgagaggttc
agaatcctgaaggaggtggagtgggagtcactggtacaggagcaagagtccccagctgaa
actgccgttcctgcttctcgatag

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